RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 SRSF4Q08170 494 aaKnown RBP12.85□□□□□ -0.35
TMEM53-203ENST00000372242 DHRS2Q13268 280 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 HIST2H2BDQ6DRA6 164 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 CENPVQ7Z7K6 275 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-203ENST00000372242 ZNF329Q86UD4 541 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 AKAP14Q86UN6 197 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 DUSP18Q8NEJ0 188 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 NUBP2Q9Y5Y2 271 aa12.85□□□□□ -0.35
TMEM53-203ENST00000372242 A0A0G2JRQ6 117 aa12.84□□□□□ -0.35
TMEM53-203ENST00000372242 CREBL2O60519 120 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-203ENST00000372242 IGF1P05019 195 aa12.84□□□□□ -0.35
TMEM53-203ENST00000372242 APELAP0DMC3 54 aa12.84□□□□□ -0.35
TMEM53-203ENST00000372242 OR2B8PP59922 312 aa12.84□□□□□ -0.35
TMEM53-203ENST00000372242 KRTAP10-3P60369 221 aa12.84□□□□□ -0.35
TMEM53-203ENST00000372242 UBE2MP61081 183 aaKnown RBP12.84□□□□□ -0.35
TMEM53-203ENST00000372242 ECSCRQ19T08 205 aa12.84□□□□□ -0.35
TMEM53-203ENST00000372242 KRTAP21-3Q3LHN1 58 aa12.84□□□□□ -0.35
TMEM53-203ENST00000372242 SLC35G3Q8N808 338 aa12.84□□□□□ -0.35
TMEM53-203ENST00000372242 OR52B4Q8NGK2 314 aa12.84□□□□□ -0.35
TMEM53-203ENST00000372242 OR4A5Q8NH83 315 aa12.84□□□□□ -0.35
TMEM53-203ENST00000372242 RNASE11Q8TAA1 199 aaKnown RBP12.84□□□□□ -0.35
TMEM53-203ENST00000372242 SRSF12Q8WXF0 261 aaKnown RBP12.84□□□□□ -0.35
TMEM53-203ENST00000372242 STAB1Q9NY15 2570 aa12.84□□□□□ -0.35
TMEM53-203ENST00000372242 MSGN1A6NI15 193 aa12.83□□□□□ -0.35
TMEM53-203ENST00000372242 DBX1A6NMT0 343 aa12.83□□□□□ -0.35
TMEM53-203ENST00000372242 E7EUB6 86 aa12.83□□□□□ -0.35
TMEM53-203ENST00000372242 HLA-GP17693 338 aa12.83□□□□□ -0.35
TMEM53-203ENST00000372242 LYZL2Q7Z4W2 148 aa12.83□□□□□ -0.35
TMEM53-203ENST00000372242 LGI3Q8N145 548 aa12.83□□□□□ -0.35
TMEM53-203ENST00000372242 C11orf44Q8N8P7 122 aa12.83□□□□□ -0.35
TMEM53-203ENST00000372242 LFNGQ8NES3 379 aa12.83□□□□□ -0.35
TMEM53-203ENST00000372242 WFDC12Q8WWY7 111 aa12.83□□□□□ -0.35
TMEM53-203ENST00000372242 RRNAD1Q96FB5 475 aaKnown RBP12.83□□□□□ -0.35
TMEM53-203ENST00000372242 ATG12O94817 140 aa12.83□□□□□ -0.36
TMEM53-203ENST00000372242 P0C879 139 aa12.83□□□□□ -0.36
TMEM53-203ENST00000372242 S100A1P23297 94 aa12.83□□□□□ -0.36
TMEM53-203ENST00000372242 NDUFA5Q16718 116 aa12.83□□□□□ -0.36
TMEM53-203ENST00000372242 PLET1Q6UQ28 207 aa12.83□□□□□ -0.36
TMEM53-203ENST00000372242 C12orf54Q6X4T0 127 aa12.83□□□□□ -0.36
TMEM53-203ENST00000372242 LYG2Q86SG7 212 aa12.83□□□□□ -0.36
TMEM53-203ENST00000372242 SGMS2Q8NHU3 365 aa12.83□□□□□ -0.36
TMEM53-203ENST00000372242 SEC22CQ9BRL7 303 aa12.83□□□□□ -0.36
TMEM53-203ENST00000372242 ALX4Q9H161 411 aaPredicted RBP12.83□□□□□ -0.36
TMEM53-203ENST00000372242 TRAV41A0A0B4J266 112 aa12.82□□□□□ -0.36
TMEM53-203ENST00000372242 A0A1B0GW64 132 aa12.82□□□□□ -0.36
TMEM53-203ENST00000372242 SNAPC5O75971 98 aa12.82□□□□□ -0.36
TMEM53-203ENST00000372242 VDAC1P21796 283 aa12.82□□□□□ -0.36
TMEM53-203ENST00000372242 Q6ZRM9 215 aa12.82□□□□□ -0.36
TMEM53-203ENST00000372242 IL22RA2Q969J5 263 aa12.82□□□□□ -0.36
TMEM53-203ENST00000372242 PHB2Q99623 299 aa12.82□□□□□ -0.36
TMEM53-203ENST00000372242 A0A0B4J293 547 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 PSMB11A5LHX3 300 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 RBMXL2O75526 392 aaKnown RBP12.81□□□□□ -0.36
TMEM53-203ENST00000372242 MAS1LP35410 378 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 RPL27AP46776 148 aaKnown RBP12.81□□□□□ -0.36
TMEM53-203ENST00000372242 MECP2P51608 486 aaKnown RBP12.81□□□□□ -0.36
TMEM53-203ENST00000372242 SRPXP78539 464 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 UNQ5815/PRO19632Q6UWF5 114 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 OR5AU1Q8NGC0 362 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 OR4A16Q8NH70 328 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 WIPF2Q8TF74 440 aaPredicted RBP12.81□□□□□ -0.36
TMEM53-203ENST00000372242 FYTTD1Q96QD9 318 aaKnown RBP12.81□□□□□ -0.36
TMEM53-203ENST00000372242 COMMD5Q9GZQ3 224 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 A0A0B4J2A0 478 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 HMX3A6NHT5 357 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 CGB1A6NKQ9 187 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 DUS4LO95620 317 aaKnown RBP12.81□□□□□ -0.36
TMEM53-203ENST00000372242 ASPHD1Q5U4P2 390 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 C3orf56Q8N813 242 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 GPR146Q96CH1 333 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 TMEM14BQ9NUH8 114 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 SHPKQ9UHJ6 478 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 OR51B2Q9Y5P1 312 aa12.81□□□□□ -0.36
TMEM53-203ENST00000372242 TET2Q6N021 2002 aaPredicted RBP12.8□□□□□ -0.36
TMEM53-203ENST00000372242 TEX50A0A1B0GTY4 177 aa12.8□□□□□ -0.36
TMEM53-203ENST00000372242 A0A1W2PN81 502 aa12.8□□□□□ -0.36
TMEM53-203ENST00000372242 C15orf61A6NNL5 157 aa12.8□□□□□ -0.36
TMEM53-203ENST00000372242 INMT-MINDY4F8WBC2 141 aa12.8□□□□□ -0.36
TMEM53-203ENST00000372242 TRAPPC2P0DI81 140 aa12.8□□□□□ -0.36
TMEM53-203ENST00000372242 TRAPPC2BP0DI82 140 aa12.8□□□□□ -0.36
TMEM53-203ENST00000372242 CHRNA7P36544 502 aa12.8□□□□□ -0.36
TMEM53-203ENST00000372242 CRIP2P52943 208 aaPredicted RBP12.8□□□□□ -0.36
TMEM53-203ENST00000372242 CFHR3Q02985 330 aa12.8□□□□□ -0.36
TMEM53-203ENST00000372242 TMEM267Q0VDI3 215 aaPredicted RBP12.8□□□□□ -0.36
TMEM53-203ENST00000372242 AKIRIN2Q53H80 203 aa12.8□□□□□ -0.36
TMEM53-203ENST00000372242 C19orf54Q5BKX5 351 aa12.8□□□□□ -0.36
TMEM53-203ENST00000372242 LRTM2Q8N967 370 aa12.8□□□□□ -0.36
TMEM53-203ENST00000372242 QTRT1Q9BXR0 403 aaKnown RBP12.8□□□□□ -0.36
TMEM53-203ENST00000372242 GON7Q9BXV9 100 aa12.8□□□□□ -0.36
TMEM53-203ENST00000372242 PRNDQ9UKY0 176 aa12.8□□□□□ -0.36
TMEM53-203ENST00000372242 TEX22C9J3V5 150 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 SOX15O60248 233 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 CD28P10747 220 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 PPIFP30405 207 aaKnown RBP12.79□□□□□ -0.36
TMEM53-203ENST00000372242 SLC35B1P78383 322 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 TCTEX1D4Q5JR98 221 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 LCNL1Q6ZST4 164 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 FAM219AQ8IW50 185 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 OR5T1Q8NG75 326 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 OR10W1Q8NGF6 305 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms