RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 EFNA4P52798 201 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 OR10D4PQ8NGN7 298 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 A0A0G2JNJ9 132 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 TMEM133Q9H2Q1 129 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 C21orf62Q9NYP8 219 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 Q9UFV3 132 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 CADP27708 2225 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 A0A1W2PRX2 142 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 K7ENP7 123 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 IGKV3-20P01619 116 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 SCGB1C2P0DMR2 95 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 DLX6P56179 175 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 IQCJQ1A5X6 159 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 C20orf204Q6ZNR8 217 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 COLCA1Q6ZS62 124 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 ANGPTL6Q8NI99 470 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 GATAD1Q8WUU5 269 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 C19orf24Q9BVV8 132 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 TCF20Q9UGU0 1960 aaKnown RBP12.37□□□□□ -0.43
NDC1-201ENST00000371429 CXCL2P19875 107 aa12.37□□□□□ -0.43
NDC1-201ENST00000371429 TMEM97Q5BJF2 176 aa12.37□□□□□ -0.43
NDC1-201ENST00000371429 STPG2Q8N412 459 aa12.37□□□□□ -0.43
NDC1-201ENST00000371429 CREBBPQ92793 2442 aa12.37□□□□□ -0.43
NDC1-201ENST00000371429 RLFQ13129 1914 aa12.37□□□□□ -0.43
NDC1-201ENST00000371429 LRP11Q86VZ4 500 aa12.37□□□□□ -0.43
NDC1-201ENST00000371429 CYB561D1Q8N8Q1 229 aa12.37□□□□□ -0.43
NDC1-201ENST00000371429 SGMS2Q8NHU3 365 aa12.37□□□□□ -0.43
NDC1-201ENST00000371429 PRSS22Q9GZN4 317 aa12.37□□□□□ -0.43
NDC1-201ENST00000371429 HERVK_113P61574 105 aa12.37□□□□□ -0.43
NDC1-201ENST00000371429 PHLDA3Q9Y5J5 127 aa12.37□□□□□ -0.43
NDC1-201ENST00000371429 SIAH2O43255 324 aa12.37□□□□□ -0.43
NDC1-201ENST00000371429 ZNF207O43670 478 aaKnown RBP12.37□□□□□ -0.43
NDC1-201ENST00000371429 NUTF2P61970 127 aaKnown RBP12.37□□□□□ -0.43
NDC1-201ENST00000371429 ZNF385CQ66K41 422 aaPredicted RBP12.37□□□□□ -0.43
NDC1-201ENST00000371429 SMDT1Q9H4I9 107 aa12.37□□□□□ -0.43
NDC1-201ENST00000371429 GPR183P32249 361 aa12.36□□□□□ -0.43
NDC1-201ENST00000371429 HIST1H1AQ02539 215 aaPredicted RBP12.36□□□□□ -0.43
NDC1-201ENST00000371429 AQP10Q96PS8 301 aa12.36□□□□□ -0.43
NDC1-201ENST00000371429 M0QZK8 103 aa12.36□□□□□ -0.43
NDC1-201ENST00000371429 RPL13AP40429 203 aaKnown RBP12.36□□□□□ -0.43
NDC1-201ENST00000371429 HNRNPA3P51991 378 aaKnown RBP12.36□□□□□ -0.43
NDC1-201ENST00000371429 LYZL4Q96KX0 146 aa12.36□□□□□ -0.43
NDC1-201ENST00000371429 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
NDC1-201ENST00000371429 MSGN1A6NI15 193 aa12.36□□□□□ -0.43
NDC1-201ENST00000371429 IGHV3-11P01762 117 aa12.36□□□□□ -0.43
NDC1-201ENST00000371429 APCSP02743 223 aa12.36□□□□□ -0.43
NDC1-201ENST00000371429 CX3CL1P78423 397 aa12.36□□□□□ -0.43
NDC1-201ENST00000371429 COL25A1Q9BXS0 654 aaPredicted RBP12.36□□□□□ -0.43
NDC1-201ENST00000371429 IGFBP3P17936 291 aaPredicted RBP12.36□□□□□ -0.43
NDC1-201ENST00000371429 CA7P43166 264 aa12.36□□□□□ -0.43
NDC1-201ENST00000371429 IBA57Q5T440 356 aaKnown RBP12.36□□□□□ -0.43
NDC1-201ENST00000371429 MYOZ3Q8TDC0 251 aa12.36□□□□□ -0.43
NDC1-201ENST00000371429 IFI27L2Q9H2X8 130 aa12.36□□□□□ -0.43
NDC1-201ENST00000371429 ZNF319Q9P2F9 582 aa12.36□□□□□ -0.43
NDC1-201ENST00000371429 FOXA2Q9Y261 457 aaPredicted RBP12.36□□□□□ -0.43
NDC1-201ENST00000371429 COL4A6Q14031 1691 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 IGKV1-9A0A0C4DH69 117 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 MBD3L4A6NDZ8 208 aaPredicted RBP12.35□□□□□ -0.43
NDC1-201ENST00000371429 MBD3L3A6NE82 208 aaPredicted RBP12.35□□□□□ -0.43
NDC1-201ENST00000371429 MBD3L5A6NJ08 208 aaPredicted RBP12.35□□□□□ -0.43
NDC1-201ENST00000371429 NBR2O15453 112 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 AMMECR1LQ6DCA0 310 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 MBD3L2Q8NHZ7 208 aaPredicted RBP12.35□□□□□ -0.43
NDC1-201ENST00000371429 TRAV40A0A0B4J280 105 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 NPIPB6E9PJ23 425 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 ACAA1P09110 424 aaPredicted RBP12.35□□□□□ -0.43
NDC1-201ENST00000371429 ARL14EPLP0DKL9 152 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 TMEM191AQ9H0A3 160 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 FUT9Q9Y231 359 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 VWA8A3KMH1 1905 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 TFF1P04155 84 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 SLC25A15Q9Y619 301 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 FAM208BQ5VWN6 2430 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 WNK2Q9Y3S1 2297 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 CRYGSP22914 178 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 CD24P25063 80 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 UCP1P25874 307 aa12.35□□□□□ -0.43
NDC1-201ENST00000371429 SNRPEP62304 92 aaKnown RBP12.35□□□□□ -0.43
NDC1-201ENST00000371429 MRPL32Q9BYC8 188 aaKnown RBP12.35□□□□□ -0.43
NDC1-201ENST00000371429 YPEL1O60688 119 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 CCL1P22362 96 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 ELOBQ15370 118 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 SCGB1D4Q6XE38 83 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 OR10S1Q8NGN2 331 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 YPEL2Q96QA6 119 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 EIF3GO75821 320 aaKnown RBP eCLIP12.34□□□□□ -0.43
NDC1-201ENST00000371429 IGHG3P01860 377 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 H2BFSP57053 126 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 FNDC1Q4ZHG4 1894 aaPredicted RBP12.34□□□□□ -0.43
NDC1-201ENST00000371429 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■■■ 33.4
NDC1-201ENST00000371429 CLEC19AQ6UXS0 136 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 SAA2-SAA4A0A096LPE2 208 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 IGHV3-66A0A0C4DH42 116 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 SIGLEC5O15389 551 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 SAA2P0DJI9 122 aaPredicted RBP12.34□□□□□ -0.43
NDC1-201ENST00000371429 FOSL1P15407 271 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 CYP2G1PQ6ZSU1 146 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 LINC00305Q7Z4B0 112 aa12.34□□□□□ -0.43
NDC1-201ENST00000371429 CLPSP04118 112 aa12.33□□□□□ -0.43
NDC1-201ENST00000371429 ANOS1P23352 680 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms