RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 H1FOOQ8IZA3 346 aaPredicted RBP3.11□□□□□ -1.91
MCF2-203ENST00000370576 PNKDQ8N490 385 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 OR5A2Q8NGI9 324 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 OR8U1Q8NH10 309 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 CCDC107Q8WV48 283 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 ABHD14BQ96IU4 210 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 PDCD1LG2Q9BQ51 273 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 NPFFR1Q9GZQ6 430 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 METTL1Q9UBP6 276 aaKnown RBP3.11□□□□□ -1.91
MCF2-203ENST00000370576 KLK13Q9UKR3 277 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 DMXL1Q9Y485 3027 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 ASH1LQ9NR48 2969 aaKnown RBP3.11□□□□□ -1.91
MCF2-203ENST00000370576 ZNF587BE7ETH6 402 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 INS-IGF2F8WCM5 200 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 GPR137BO60478 399 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 TSPAN15O95858 294 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 IGHV3-13P01766 116 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 OR5H8P0DN80 308 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 TSPOP30536 169 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 KIR2DS2P43631 304 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 SRYQ05066 204 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 FOXF2Q12947 444 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 HMGN3Q15651 99 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 C11orf71Q6IPW1 123 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 BAP18Q8IXM2 172 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 GVQW1Q8N7I0 195 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 RPUSD4Q96CM3 377 aaKnown RBP3.11□□□□□ -1.91
MCF2-203ENST00000370576 GALNT14Q96FL9 552 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 TMEM101Q96IK0 257 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 HES7Q9BYE0 225 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 TRGV5A0A0B4J1U4 118 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 HMSDA8MTL9 139 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 EPM2AB3EWF7 344 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 F5H697 171 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 XKRYO14609 159 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 CYB5AP00167 134 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 AMBPP02760 352 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 PGA5P0DJD9 388 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 MYL9P24844 172 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 ZNF137PP52743 207 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 PSG9Q00887 426 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 ANXA2RQ3ZCQ2 193 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 BCL2L15Q5TBC7 163 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 C9orf106Q8NAJ2 232 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 FAM3DQ96BQ1 224 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 NRIP2Q9BQI9 281 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 RNF121Q9H920 327 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 TAS2R4Q9NYW5 299 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 MRPL27Q9P0M9 148 aaKnown RBP3.11□□□□□ -1.91
MCF2-203ENST00000370576 GNG8Q9UK08 70 aa3.11□□□□□ -1.91
MCF2-203ENST00000370576 UNC13CQ8NB66 2214 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 BAHCC1Q9P281 2608 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 OR5B21A6NL26 309 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 GCGP01275 180 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 OR5G3P0C626 314 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 FGF12P61328 243 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 ZNF345Q14585 488 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 Q5BKY6 102 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 PRSS54Q6PEW0 395 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 SHISA6Q6ZSJ9 500 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 LCNL1Q6ZST4 164 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 Q71RC1 249 aaPredicted RBP3.1□□□□□ -1.91
MCF2-203ENST00000370576 KLHDC1Q8N7A1 406 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 OR4F17Q8NGA8 305 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 OR10R2Q8NGX6 335 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 TMEM230Q96A57 120 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 OR4F4Q96R69 305 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 PHB2Q99623 299 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 DNAH3Q8TD57 4116 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 DUXBA0A1W2PPF3 345 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 UBE2QL1A1L167 161 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 NCBP2LA6PVI3 153 aaKnown RBP3.1□□□□□ -1.91
MCF2-203ENST00000370576 SHISA9B4DS77 424 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 SMKR1H3BMG3 65 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 H7C1C5 153 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 LYRM1O43325 122 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 ZNF780AO75290 641 aaPredicted RBP3.1□□□□□ -1.91
MCF2-203ENST00000370576 NCR1O76036 304 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 IFNA17P01571 189 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 GIPP09681 153 aaPredicted RBP3.1□□□□□ -1.91
MCF2-203ENST00000370576 NHLRC4P0CG21 123 aaPredicted RBP3.1□□□□□ -1.91
MCF2-203ENST00000370576 SELEP16581 610 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 ZFP36P26651 326 aaKnown RBP3.1□□□□□ -1.91
MCF2-203ENST00000370576 LCN6P62502 163 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 GUCA2BQ16661 112 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 ZNF283Q8N7M2 679 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 OR51A2Q8NGJ7 313 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 NEDD4LQ96PU5 975 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 SLC25A21Q9BQT8 299 aaPredicted RBP3.1□□□□□ -1.91
MCF2-203ENST00000370576 REG4Q9BYZ8 158 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 CSAG2Q9Y5P2 127 aa3.1□□□□□ -1.91
MCF2-203ENST00000370576 IGHV1-18A0A0C4DH31 117 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 ZNF816-ZNF321PA0A0X1KG74 233 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 SPAARA0A1B0GVQ0 90 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 MEIOCA2RUB1 952 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 RER1O15258 196 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 PITX3O75364 302 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 MRPL3P09001 348 aaKnown RBP3.09□□□□□ -1.91
MCF2-203ENST00000370576 OR4A8P0C604 315 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 HIST1H1DP16402 221 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms