RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 CBY1Q9Y3M2 126 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 IGHV3-64DA0A0J9YX35 117 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 C5orf63A6NC05 138 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A10PA6NDY2 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A18PA6NE21 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A16PA6NEW6 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A20PA6NIJ5 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A8PA6NJQ4 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A7PA6NKC0 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A22PA8MWA6 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A12PA8MX19 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A5PA8MXJ8 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A23PA8MXZ1 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 C22orf46C9J442 243 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 MPPED1O15442 326 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 LHBP01229 141 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 TK1P04183 234 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 CTXN2P0C2S0 81 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A15PP0C7V4 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A13PP0C7W8 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A14PP0C7W9 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM90A24PP0C7X0 464 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 BCL2P10415 239 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 IRF2P14316 349 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 CA6P23280 308 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 FAM3BP58499 235 aaPredicted RBP12.21□□□□□ -0.45
LMO4-201ENST00000370542 SERF2P84101 59 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 USF2Q15853 346 aaPredicted RBP12.21□□□□□ -0.45
LMO4-201ENST00000370542 PRAMEF6Q5VXH4 476 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 MRPL21Q7Z2W9 205 aaKnown RBP12.21□□□□□ -0.45
LMO4-201ENST00000370542 RTN4RL2Q86UN3 420 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 OR52M1Q8NGK5 317 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 SCGB1C1Q8TD33 95 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 RAB40CQ96S21 281 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 NAT8Q9UHE5 227 aa12.21□□□□□ -0.45
LMO4-201ENST00000370542 UBE2J1Q9Y385 318 aaPredicted RBP12.21□□□□□ -0.45
LMO4-201ENST00000370542 SOX21Q9Y651 276 aaPredicted RBP12.21□□□□□ -0.45
LMO4-201ENST00000370542 IGSF23A1L1A6 192 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 FAM24AA6NFZ4 105 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 PHOX2AO14813 284 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 VDAC1P21796 283 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 CCL20P78556 96 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 ID3Q02535 119 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 ZNF343Q6P1L6 599 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 C6orf201Q7Z4U5 140 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 SLC35G3Q8N808 338 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 OR2AE1Q8NHA4 323 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 ANAPC16Q96DE5 110 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 DUX5Q96PT3 197 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 Q9N2K0 584 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 CTSZQ9UBR2 303 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 SLC7A11Q9UPY5 501 aa12.2□□□□□ -0.46
LMO4-201ENST00000370542 IGKV1D-8A0A087WSZ0 117 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 TRAV40A0A0B4J280 105 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 M0R143 59 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 ENSAO43768 121 aaKnown RBP12.19□□□□□ -0.46
LMO4-201ENST00000370542 FCN3O75636 299 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 LIPFP07098 398 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 NPBWR2P48146 333 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 SP6Q3SY56 376 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 TEX36Q5VZQ5 186 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 FAM90A2PQ658T7 463 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 TREML4Q6UXN2 200 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 GCSAMQ8N6F7 178 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 OR5C1Q8NGR4 320 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 KAAG1Q9UBP8 84 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 PIGLQ9Y2B2 252 aa12.19□□□□□ -0.46
LMO4-201ENST00000370542 TRAV38-1A0A0B4J264 116 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 PDCD6O75340 191 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 GZMBP10144 247 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 DYNLT3P51808 116 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 CEBPGP53567 150 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 FGF12P61328 243 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 HOXA4Q00056 320 aaPredicted RBP12.18□□□□□ -0.46
LMO4-201ENST00000370542 CRIP3Q6Q6R5 217 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 CENPVQ7Z7K6 275 aaPredicted RBP12.18□□□□□ -0.46
LMO4-201ENST00000370542 C11orf53Q8IXP5 236 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 OR5D13Q8NGL4 314 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 TMEM170AQ8WVE7 144 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 MISP3Q96FF7 219 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 PRO1933Q9H354 126 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 ZNF319Q9P2F9 582 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 URGCP-MRPS24S4R325 110 aa12.18□□□□□ -0.46
LMO4-201ENST00000370542 IGHV3OR16-10A0A075B7F0 116 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 OOEPA6NGQ2 149 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 SRRM5B3KS81 715 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 TMEM250H0YL14 139 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 AMBPP02760 352 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 CFHR2P36980 270 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 FXYD4P59646 89 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 RAB11AP62491 216 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 MZT1Q08AG7 82 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 GAGE1Q13065 139 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 DEFB112Q30KQ8 113 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 PHLDA2Q53GA4 152 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 SLC25A24Q6NUK1 477 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 Q6YL49 198 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 CYP2G1PQ6ZSU1 146 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 RNF144BQ7Z419 303 aa12.17□□□□□ -0.46
LMO4-201ENST00000370542 TGIF2LXQ8IUE1 241 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms