RNA–Protein interactions for RNA: ENST00000370536.4

SOX3-201, Transcript of SRY-box 3, humanhuman

APPRIS P1 BASIC

Gene SOX3, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3-201ENST00000370536 LINC00574Q9H8X3 128 aa17.17■□□□□ 0.34
SOX3-201ENST00000370536 NGBQ9NPG2 151 aa17.17■□□□□ 0.34
SOX3-201ENST00000370536 TRAV38-1A0A0B4J264 116 aa17.16■□□□□ 0.34
SOX3-201ENST00000370536 FAM90A9PA6NNJ1 464 aa17.16■□□□□ 0.34
SOX3-201ENST00000370536 MRPS11P82912 194 aaKnown RBP17.16■□□□□ 0.34
SOX3-201ENST00000370536 AARDQ4LEZ3 155 aa17.16■□□□□ 0.34
SOX3-201ENST00000370536 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.16■□□□□ 0.34
SOX3-201ENST00000370536 HIST1H2BLQ99880 126 aa17.16■□□□□ 0.34
SOX3-201ENST00000370536 C15orf62A8K5M9 175 aa17.15■□□□□ 0.34
SOX3-201ENST00000370536 VSTM5A8MXK1 200 aa17.15■□□□□ 0.34
SOX3-201ENST00000370536 E7EQL1 145 aa17.15■□□□□ 0.34
SOX3-201ENST00000370536 TMEM178BH3BS89 294 aa17.15■□□□□ 0.34
SOX3-201ENST00000370536 PMS2P11Q13670 270 aa17.15■□□□□ 0.34
SOX3-201ENST00000370536 C4orf17Q53FE4 359 aa17.15■□□□□ 0.34
SOX3-201ENST00000370536 OR4S2Q8NH73 311 aa17.15■□□□□ 0.34
SOX3-201ENST00000370536 CCL17Q92583 94 aa17.15■□□□□ 0.34
SOX3-201ENST00000370536 TMEM140Q9NV12 185 aa17.15■□□□□ 0.34
SOX3-201ENST00000370536 SLC25A10Q9UBX3 287 aaPredicted RBP17.15■□□□□ 0.34
SOX3-201ENST00000370536 hADV38S2A0JD32 116 aa17.15■□□□□ 0.34
SOX3-201ENST00000370536 FGF8P55075 233 aaPredicted RBP17.15■□□□□ 0.34
SOX3-201ENST00000370536 OR10A7Q8NGE5 316 aa17.15■□□□□ 0.34
SOX3-201ENST00000370536 RNASE6Q93091 150 aaKnown RBP17.15■□□□□ 0.34
SOX3-201ENST00000370536 RPUSD1Q9UJJ7 312 aaKnown RBP17.15■□□□□ 0.34
SOX3-201ENST00000370536 HCFC1P51610 2035 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 PPIAL4EA0A075B759 164 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 PPIAL4DF5H284 164 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 FCN3O75636 299 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 MBP02144 154 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 PPIAL4FP0DN26 164 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 FGF7P21781 194 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 PLA2G5P39877 138 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 SPCS3P61009 180 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 RELBQ01201 579 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 TMEM183AQ8IXX5 376 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 ZNRD1Q9P1U0 126 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 PPIAL4AQ9Y536 164 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 LINC00312Q9Y6C7 94 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 A0A087X0M5 115 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 A0A1B0GX30 115 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 MAP1LC3B2A6NCE7 125 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 THBS3P49746 956 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 TFF3Q07654 80 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 MAP1LC3BQ9GZQ8 125 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 SRD5A3Q9H8P0 318 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 DYNLRB1Q9NP97 96 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 TMEM106BQ9NUM4 274 aa17.14■□□□□ 0.33
SOX3-201ENST00000370536 DVL1O14640 695 aa17.13■□□□□ 0.33
SOX3-201ENST00000370536 IGKV1D-33P01593 117 aa17.13■□□□□ 0.33
SOX3-201ENST00000370536 IGKV1-33P01594 117 aa17.13■□□□□ 0.33
SOX3-201ENST00000370536 PAX1P15863 534 aa17.13■□□□□ 0.33
SOX3-201ENST00000370536 UCNP55089 124 aa17.13■□□□□ 0.33
SOX3-201ENST00000370536 GNB2P62879 340 aa17.13■□□□□ 0.33
SOX3-201ENST00000370536 SLC39A9Q9NUM3 307 aa17.13■□□□□ 0.33
SOX3-201ENST00000370536 NAT8Q9UHE5 227 aa17.13■□□□□ 0.33
SOX3-201ENST00000370536 PKDREJQ9NTG1 2253 aa17.13■□□□□ 0.33
SOX3-201ENST00000370536 RPL31P62899 125 aaKnown RBP17.12■□□□□ 0.33
SOX3-201ENST00000370536 WDR25Q64LD2 544 aaPredicted RBP17.12■□□□□ 0.33
SOX3-201ENST00000370536 ACSM6Q6P461 480 aa17.12■□□□□ 0.33
SOX3-201ENST00000370536 SLC25A48Q6ZT89 311 aaKnown RBP17.12■□□□□ 0.33
SOX3-201ENST00000370536 OR4X1Q8NH49 305 aa17.12■□□□□ 0.33
SOX3-201ENST00000370536 RNASEH2CQ8TDP1 164 aaKnown RBP17.12■□□□□ 0.33
SOX3-201ENST00000370536 IGF2RP11717 2491 aa17.12■□□□□ 0.33
SOX3-201ENST00000370536 JOSD1Q15040 202 aaPredicted RBP17.12■□□□□ 0.33
SOX3-201ENST00000370536 VWC2Q2TAL6 325 aa17.12■□□□□ 0.33
SOX3-201ENST00000370536 LYPD2Q6UXB3 125 aa17.12■□□□□ 0.33
SOX3-201ENST00000370536 ZCCHC14Q8WYQ9 949 aaKnown RBP17.12■□□□□ 0.33
SOX3-201ENST00000370536 SSX3Q99909 188 aa17.12■□□□□ 0.33
SOX3-201ENST00000370536 PYGO2Q9BRQ0 406 aa17.12■□□□□ 0.33
SOX3-201ENST00000370536 KALRNO60229 2985 aa17.11■□□□□ 0.33
SOX3-201ENST00000370536 FAM90A27PA6NNH2 459 aa17.11■□□□□ 0.33
SOX3-201ENST00000370536 CCL3L1P16619 93 aa17.11■□□□□ 0.33
SOX3-201ENST00000370536 CASP6P55212 293 aa17.11■□□□□ 0.33
SOX3-201ENST00000370536 TMEM30BQ3MIR4 351 aa17.11■□□□□ 0.33
SOX3-201ENST00000370536 RPP25LQ8N5L8 163 aaKnown RBP17.11■□□□□ 0.33
SOX3-201ENST00000370536 OR52E5Q8NH55 327 aa17.11■□□□□ 0.33
SOX3-201ENST00000370536 LHX4Q969G2 390 aa17.11■□□□□ 0.33
SOX3-201ENST00000370536 PRO1933Q9H354 126 aa17.11■□□□□ 0.33
SOX3-201ENST00000370536 YLPM1P49750 1951 aaKnown RBP17.11■□□□□ 0.33
SOX3-201ENST00000370536 A0A1B0GV90 55 aa17.11■□□□□ 0.33
SOX3-201ENST00000370536 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.11■□□□□ 0.33
SOX3-201ENST00000370536 CA7P43166 264 aa17.11■□□□□ 0.33
SOX3-201ENST00000370536 VDAC2P45880 294 aaPredicted RBP17.11■□□□□ 0.33
SOX3-201ENST00000370536 LINC01560Q8TB33 94 aa17.11■□□□□ 0.33
SOX3-201ENST00000370536 ADTRPQ96IZ2 230 aa17.11■□□□□ 0.33
SOX3-201ENST00000370536 HEYLQ9NQ87 328 aaPredicted RBP17.11■□□□□ 0.33
SOX3-201ENST00000370536 PFN1P07737 140 aaKnown RBP17.1■□□□□ 0.33
SOX3-201ENST00000370536 RPP30P78346 268 aaKnown RBP17.1■□□□□ 0.33
SOX3-201ENST00000370536 MEF2CQ06413 473 aaPredicted RBP17.1■□□□□ 0.33
SOX3-201ENST00000370536 TMEM241Q24JQ0 296 aa17.1■□□□□ 0.33
SOX3-201ENST00000370536 LBHQ53QV2 105 aaPredicted RBP17.1■□□□□ 0.33
SOX3-201ENST00000370536 OR4A47Q6IF82 309 aa17.1■□□□□ 0.33
SOX3-201ENST00000370536 CYP2G1PQ6ZSU1 146 aa17.1■□□□□ 0.33
SOX3-201ENST00000370536 ZNF709Q8N972 641 aa17.1■□□□□ 0.33
SOX3-201ENST00000370536 GAL3ST2Q9H3Q3 398 aa17.1■□□□□ 0.33
SOX3-201ENST00000370536 TCF19Q9Y242 345 aa17.1■□□□□ 0.33
SOX3-201ENST00000370536 CTXND1A0A1B0GTU2 59 aa17.09■□□□□ 0.33
SOX3-201ENST00000370536 C17orf112F2Z3M2 114 aa17.09■□□□□ 0.33
SOX3-201ENST00000370536 PLAUP00749 431 aa17.09■□□□□ 0.33
SOX3-201ENST00000370536 PDLIM3Q53GG5 364 aaPredicted RBP17.09■□□□□ 0.33
SOX3-201ENST00000370536 TMEM200BQ69YZ2 307 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms