RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 ECI1P42126 302 aa15.72■□□□□ 0.11
SMNDC1-201ENST00000369592 CTRB2Q6GPI1 263 aa15.72■□□□□ 0.11
SMNDC1-201ENST00000369592 IL34Q6ZMJ4 242 aa15.72■□□□□ 0.11
SMNDC1-201ENST00000369592 LAX1Q8IWV1 398 aa15.72■□□□□ 0.11
SMNDC1-201ENST00000369592 NECAP1Q8NC96 275 aa15.72■□□□□ 0.11
SMNDC1-201ENST00000369592 FCAMRQ8WWV6 532 aa15.72■□□□□ 0.11
SMNDC1-201ENST00000369592 TMEM140Q9NV12 185 aa15.72■□□□□ 0.11
SMNDC1-201ENST00000369592 CCDC59Q9P031 241 aaKnown RBP15.72■□□□□ 0.11
SMNDC1-201ENST00000369592 ANKRD34BA5PLL1 514 aa15.71■□□□□ 0.11
SMNDC1-201ENST00000369592 PSMB6P28072 239 aa15.71■□□□□ 0.11
SMNDC1-201ENST00000369592 LPCAT3Q6P1A2 487 aa15.71■□□□□ 0.11
SMNDC1-201ENST00000369592 C19orf35Q6ZS72 473 aa15.71■□□□□ 0.11
SMNDC1-201ENST00000369592 CMTM1Q8IZ96 169 aa15.71■□□□□ 0.11
SMNDC1-201ENST00000369592 C15orf40Q8WUR7 153 aa15.71■□□□□ 0.11
SMNDC1-201ENST00000369592 PRR25Q96S07 402 aa15.71■□□□□ 0.11
SMNDC1-201ENST00000369592 ZNF256Q9Y2P7 627 aaPredicted RBP15.71■□□□□ 0.11
SMNDC1-201ENST00000369592 IGLC7A0M8Q6 106 aa15.7■□□□□ 0.1
SMNDC1-201ENST00000369592 M0QYG6 137 aa15.7■□□□□ 0.1
SMNDC1-201ENST00000369592 CD74P04233 296 aa15.7■□□□□ 0.1
SMNDC1-201ENST00000369592 TBPP20226 339 aa15.7■□□□□ 0.1
SMNDC1-201ENST00000369592 TSPAN5P62079 268 aa15.7■□□□□ 0.1
SMNDC1-201ENST00000369592 FYTTD1Q96QD9 318 aaKnown RBP15.7■□□□□ 0.1
SMNDC1-201ENST00000369592 B9D2Q9BPU9 175 aa15.7■□□□□ 0.1
SMNDC1-201ENST00000369592 SRSF8Q9BRL6 282 aaKnown RBP15.7■□□□□ 0.1
SMNDC1-201ENST00000369592 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.69■□□□□ 0.1
SMNDC1-201ENST00000369592 H3BMQ9 156 aa15.69■□□□□ 0.1
SMNDC1-201ENST00000369592 BMPR1BO00238 502 aa15.69■□□□□ 0.1
SMNDC1-201ENST00000369592 SAP30O75446 220 aa15.69■□□□□ 0.1
SMNDC1-201ENST00000369592 CD3DP04234 171 aa15.69■□□□□ 0.1
SMNDC1-201ENST00000369592 PTBP1P26599 531 aaKnown RBP eCLIP15.69■□□□□ 0.1
SMNDC1-201ENST00000369592 LPAR6P43657 344 aa15.69■□□□□ 0.1
SMNDC1-201ENST00000369592 ATP5G2Q06055 141 aa15.69■□□□□ 0.1
SMNDC1-201ENST00000369592 DEFB121Q5J5C9 76 aa15.69■□□□□ 0.1
SMNDC1-201ENST00000369592 SLIRPQ9GZT3 109 aaKnown RBP15.69■□□□□ 0.1
SMNDC1-201ENST00000369592 HRASLSQ9HDD0 168 aa15.69■□□□□ 0.1
SMNDC1-201ENST00000369592 MARCH11A6NNE9 402 aa15.68■□□□□ 0.1
SMNDC1-201ENST00000369592 GABARAPH6UMI1 98 aa15.68■□□□□ 0.1
SMNDC1-201ENST00000369592 OR2J3O76001 311 aa15.68■□□□□ 0.1
SMNDC1-201ENST00000369592 IGLV1-51P01701 117 aa15.68■□□□□ 0.1
SMNDC1-201ENST00000369592 SSBP1Q04837 148 aaKnown RBP15.68■□□□□ 0.1
SMNDC1-201ENST00000369592 DCTN2Q13561 401 aaKnown RBP15.68■□□□□ 0.1
SMNDC1-201ENST00000369592 EXOSC2Q13868 293 aaKnown RBP15.68■□□□□ 0.1
SMNDC1-201ENST00000369592 C15orf32Q32M92 178 aa15.68■□□□□ 0.1
SMNDC1-201ENST00000369592 PHLDA2Q53GA4 152 aa15.68■□□□□ 0.1
SMNDC1-201ENST00000369592 SLC38A6Q8IZM9 456 aa15.68■□□□□ 0.1
SMNDC1-201ENST00000369592 ARRDC1Q8N5I2 433 aa15.68■□□□□ 0.1
SMNDC1-201ENST00000369592 TMEM229BQ8NBD8 167 aa15.68■□□□□ 0.1
SMNDC1-201ENST00000369592 IGLV11-55A0A075B6I3 123 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 CTDSPLO15194 276 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 NDUFB8O95169 186 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 IGKV1-39P01597 117 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 IGKV1D-39P04432 117 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 RND3P61587 244 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 RNASE12Q5GAN4 147 aaKnown RBP15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 TBC1D26Q86UD7 250 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 DMBX1Q8NFW5 382 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 OR4D10Q8NGI6 311 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 OR9G4Q8NGQ1 327 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 ISOC1Q96CN7 298 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 SOSTQ9BQB4 213 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 NXF2Q9GZY0 626 aaKnown RBP15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 SIGLEC8Q9NYZ4 499 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 CEPT1Q9Y6K0 416 aa15.67■□□□□ 0.1
SMNDC1-201ENST00000369592 TEX50A0A1B0GTY4 177 aa15.66■□□□□ 0.1
SMNDC1-201ENST00000369592 SPNP16150 400 aa15.66■□□□□ 0.1
SMNDC1-201ENST00000369592 MECP2P51608 486 aaKnown RBP15.66■□□□□ 0.1
SMNDC1-201ENST00000369592 SYNJ2BPP57105 145 aa15.66■□□□□ 0.1
SMNDC1-201ENST00000369592 MRPS10P82664 201 aaKnown RBP15.66■□□□□ 0.1
SMNDC1-201ENST00000369592 RNASE10Q5GAN6 216 aaKnown RBP15.66■□□□□ 0.1
SMNDC1-201ENST00000369592 FAM209BQ5JX69 171 aa15.66■□□□□ 0.1
SMNDC1-201ENST00000369592 SMIM4Q8WVI0 70 aa15.66■□□□□ 0.1
SMNDC1-201ENST00000369592 MRGPRFQ96AM1 343 aa15.66■□□□□ 0.1
SMNDC1-201ENST00000369592 OR4C12Q96R67 309 aa15.66■□□□□ 0.1
SMNDC1-201ENST00000369592 QTRT1Q9BXR0 403 aaKnown RBP15.66■□□□□ 0.1
SMNDC1-201ENST00000369592 NDUFA4L2Q9NRX3 87 aa15.66■□□□□ 0.1
SMNDC1-201ENST00000369592 FBXL7Q9UJT9 491 aa15.66■□□□□ 0.1
SMNDC1-201ENST00000369592 RGS5O15539 181 aa15.65■□□□□ 0.1
SMNDC1-201ENST00000369592 KRASP01116 189 aa15.65■□□□□ 0.1
SMNDC1-201ENST00000369592 CSN3P07498 182 aa15.65■□□□□ 0.1
SMNDC1-201ENST00000369592 RPA2P15927 270 aa15.65■□□□□ 0.1
SMNDC1-201ENST00000369592 G6PCP35575 357 aa15.65■□□□□ 0.1
SMNDC1-201ENST00000369592 THOC7Q6I9Y2 204 aaKnown RBP15.65■□□□□ 0.1
SMNDC1-201ENST00000369592 OR6Q1Q8NGQ2 317 aa15.65■□□□□ 0.1
SMNDC1-201ENST00000369592 ZNF486Q96H40 463 aaPredicted RBP15.65■□□□□ 0.1
SMNDC1-201ENST00000369592 SEC22AQ96IW7 307 aa15.65■□□□□ 0.1
SMNDC1-201ENST00000369592 CCDC140Q96MF4 163 aa15.65■□□□□ 0.1
SMNDC1-201ENST00000369592 ELOVL1Q9BW60 279 aa15.65■□□□□ 0.1
SMNDC1-201ENST00000369592 COMMD5Q9GZQ3 224 aa15.65■□□□□ 0.1
SMNDC1-201ENST00000369592 REG1AP05451 166 aa15.64■□□□□ 0.09
SMNDC1-201ENST00000369592 HIST1H1BP16401 226 aaKnown RBP15.64■□□□□ 0.09
SMNDC1-201ENST00000369592 TAS2R19P59542 299 aa15.64■□□□□ 0.09
SMNDC1-201ENST00000369592 ERVK-16P61578 105 aa15.64■□□□□ 0.09
SMNDC1-201ENST00000369592 WT1-ASQ06250 92 aa15.64■□□□□ 0.09
SMNDC1-201ENST00000369592 OR10W1Q8NGF6 305 aa15.64■□□□□ 0.09
SMNDC1-201ENST00000369592 TERB2Q8NHR7 220 aa15.64■□□□□ 0.09
SMNDC1-201ENST00000369592 TMEM14BQ9NUH8 114 aa15.64■□□□□ 0.09
SMNDC1-201ENST00000369592 RABL2AQ9UBK7 228 aaPredicted RBP15.64■□□□□ 0.09
SMNDC1-201ENST00000369592 RABL2BQ9UNT1 228 aa15.64■□□□□ 0.09
SMNDC1-201ENST00000369592 DPPA5A6NC42 116 aa15.63■□□□□ 0.09
SMNDC1-201ENST00000369592 DBX1A6NMT0 343 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms