RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 RIPPLY3P57055 190 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 RPL23P62829 140 aaKnown RBP5.7□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF154Q13106 437 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 TMEM41BQ5BJD5 291 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 Q5PR19 223 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 SLC25A40Q8TBP6 338 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 C18orf12Q96KH6 178 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 RSG1Q9BU20 258 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 FBXL7Q9UJT9 491 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 R4GMQ9 66 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 MAST4O15021 2626 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 TRAV26-1A0A087WT03 109 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 H0YJW9 148 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 CCL2P13500 99 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 RPL23AP62750 156 aaKnown RBP5.7□□□□□ -1.5
CSDE1-204ENST00000369530 PMCHL1Q16048 86 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 IAH1Q2TAA2 248 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-204ENST00000369530 TIMM23BQ5SRD1 257 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 TUSC5Q8IXB3 177 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 DYRK2Q92630 601 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 OR5B12Q96R08 314 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 PARP12Q9H0J9 701 aaKnown RBP5.7□□□□□ -1.5
CSDE1-204ENST00000369530 G6PC2Q9NQR9 355 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 PLEKHJ1Q9NW61 149 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 TENM1Q9UKZ4 2725 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF878C9JN71 531 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 MPPED1O15442 326 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 LMX1BO60663 402 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 GPX1P07203 203 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 B4GALT1P15291 398 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 IL3RAP26951 378 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 THBS3P49746 956 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 RAB9AP51151 201 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 BAXQ07812 192 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 MSMO1Q15800 293 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 SSX8Q7RTT4 187 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 C5orf17Q8NAS9 161 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 CITED2Q99967 270 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-204ENST00000369530 SPXQ9BT56 116 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 PBOV1Q9GZY1 135 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 BANF2Q9H503 90 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 IGHV1-18A0A0C4DH31 117 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 TMPRSS2O15393 492 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 DHHO43323 396 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 MRPL33O75394 65 aaKnown RBP5.69□□□□□ -1.5
CSDE1-204ENST00000369530 SAP30O75446 220 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 MPIG6BO95866 241 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF121P58317 390 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-204ENST00000369530 S100A10P60903 97 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 MRPL54Q6P161 138 aaKnown RBP5.69□□□□□ -1.5
CSDE1-204ENST00000369530 SHISA2Q6UWI4 295 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 OR5D14Q8NGL3 314 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 OR13G1Q8NGZ3 307 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 TMEM37Q8WXS4 190 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 RFNGQ9Y644 331 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 ICE1Q9Y2F5 2266 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 A0A096LPE4 126 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 A0A1W2PPZ6 126 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 FOXI3A8MTJ6 420 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-204ENST00000369530 ISG15P05161 165 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 MDKP21741 143 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-204ENST00000369530 RUNX1Q01196 453 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 FAM27E3Q08E93 113 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 ARFRP1Q13795 201 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 VAMP3Q15836 100 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 KCNIP4Q6PIL6 250 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 OR2G3Q8NGZ4 309 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 HSPB9Q9BQS6 159 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 C12orf49Q9H741 205 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF586Q9NXT0 402 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 RNF114Q9Y508 228 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 NIPBLQ6KC79 2804 aaeCLIP5.69□□□□□ -1.59e-7■■□□□ 11.9
CSDE1-204ENST00000369530 SACSQ9NZJ4 4579 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 DUXBA0A1W2PPF3 345 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 SLC22A20A6NK97 555 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 TMEM14DPA8MWL7 114 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 PRRG2O14669 202 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 HLA-HP01893 362 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 EWSR1Q01844 656 aaKnown RBP eCLIP5.69□□□□□ -1.5
CSDE1-204ENST00000369530 BVES-AS1Q5T3Y7 98 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 C19orf35Q6ZS72 473 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 Q6ZVH6 145 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF611Q8N823 705 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 VN1R17PQ8TDU5 208 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 OR51I2Q9H344 312 aa5.69□□□□□ -1.5
CSDE1-204ENST00000369530 TRBV9A0A0B4J1U6 114 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 C17orf112F2Z3M2 114 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 DBHP09172 617 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 ROM1Q03395 351 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 CEACAM16Q2WEN9 425 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 OR10J3Q5JRS4 329 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 WFDC8Q8IUA0 241 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 ODF3L1Q8IXM7 274 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 GJC3Q8NFK1 279 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 OR1B1Q8NGR6 318 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 DPF1Q92782 380 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 IL22RA2Q969J5 263 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 MRAP2Q96G30 205 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 SIGMAR1Q99720 223 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 MCTS1Q9ULC4 181 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms