RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SNRNP70P08621 437 aaKnown RBP19.15■□□□□ 0.66
SNX3-203ENST00000368979 IGHV4-38-2P0DP08 117 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 MYOD1P15172 320 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 RPL8P62917 257 aaKnown RBP19.15■□□□□ 0.66
SNX3-203ENST00000368979 EBI3Q14213 229 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 CYTL1Q9NRR1 136 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 FBXL17Q9UF56 701 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 WNK2Q9Y3S1 2297 aa19.14■□□□□ 0.65
SNX3-203ENST00000368979 TAAR5O14804 337 aa19.14■□□□□ 0.65
SNX3-203ENST00000368979 LY86O95711 162 aa19.14■□□□□ 0.65
SNX3-203ENST00000368979 VDAC2P45880 294 aaPredicted RBP19.14■□□□□ 0.65
SNX3-203ENST00000368979 NHLH2Q02577 135 aa19.14■□□□□ 0.65
SNX3-203ENST00000368979 BAXQ07812 192 aa19.14■□□□□ 0.65
SNX3-203ENST00000368979 KLF17Q5JT82 389 aaPredicted RBP19.14■□□□□ 0.65
SNX3-203ENST00000368979 CLEC9AQ6UXN8 241 aa19.14■□□□□ 0.65
SNX3-203ENST00000368979 OR5B3Q8NH48 314 aa19.14■□□□□ 0.65
SNX3-203ENST00000368979 EAF1Q96JC9 268 aaPredicted RBP19.14■□□□□ 0.65
SNX3-203ENST00000368979 ZNF430Q9H8G1 570 aaPredicted RBP19.14■□□□□ 0.65
SNX3-203ENST00000368979 FBLN7Q53RD9 439 aa19.13■□□□□ 0.65
SNX3-203ENST00000368979 THNSL2Q86YJ6 484 aa19.13■□□□□ 0.65
SNX3-203ENST00000368979 Q8N6K4 173 aa19.13■□□□□ 0.65
SNX3-203ENST00000368979 OR2T10Q8NGZ9 312 aa19.13■□□□□ 0.65
SNX3-203ENST00000368979 SIGLEC9Q9Y336 463 aa19.13■□□□□ 0.65
SNX3-203ENST00000368979 TET2Q6N021 2002 aaPredicted RBP19.12■□□□□ 0.65
SNX3-203ENST00000368979 TEX50A0A1B0GTY4 177 aa19.12■□□□□ 0.65
SNX3-203ENST00000368979 CD24P25063 80 aa19.12■□□□□ 0.65
SNX3-203ENST00000368979 PRCDQ00LT1 54 aa19.12■□□□□ 0.65
SNX3-203ENST00000368979 SPANXN5Q5MJ07 72 aa19.12■□□□□ 0.65
SNX3-203ENST00000368979 TEX261Q6UWH6 196 aa19.12■□□□□ 0.65
SNX3-203ENST00000368979 TMEM14EPQ6UXP3 125 aa19.12■□□□□ 0.65
SNX3-203ENST00000368979 BRD3OSQ6XYD6 125 aa19.12■□□□□ 0.65
SNX3-203ENST00000368979 ZNF471Q9BX82 626 aaPredicted RBP19.12■□□□□ 0.65
SNX3-203ENST00000368979 METTL1Q9UBP6 276 aaKnown RBP19.12■□□□□ 0.65
SNX3-203ENST00000368979 U3KQ87 197 aa19.12■□□□□ 0.65
SNX3-203ENST00000368979 NDUFA3O95167 84 aa19.11■□□□□ 0.65
SNX3-203ENST00000368979 CFDP00746 253 aaPredicted RBP19.11■□□□□ 0.65
SNX3-203ENST00000368979 SULT1A1P50225 295 aa19.11■□□□□ 0.65
SNX3-203ENST00000368979 UBA52P62987 128 aaKnown RBP19.11■□□□□ 0.65
SNX3-203ENST00000368979 TMEM267Q0VDI3 215 aaPredicted RBP19.11■□□□□ 0.65
SNX3-203ENST00000368979 NPBQ8NG41 125 aa19.11■□□□□ 0.65
SNX3-203ENST00000368979 OR8H1Q8NGG4 311 aa19.11■□□□□ 0.65
SNX3-203ENST00000368979 OR4C12Q96R67 309 aa19.11■□□□□ 0.65
SNX3-203ENST00000368979 SMIM3Q9BZL3 60 aa19.11■□□□□ 0.65
SNX3-203ENST00000368979 PDZD2O15018 2839 aa19.11■□□□□ 0.65
SNX3-203ENST00000368979 RRHO14718 337 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 CST7O76096 145 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 HOXA1P49639 335 aaPredicted RBP19.1■□□□□ 0.65
SNX3-203ENST00000368979 F2RL1P55085 397 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 HES1Q14469 280 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 MMDQ15546 238 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 PRSS8Q16651 343 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 STX12Q86Y82 276 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 MMD2Q8IY49 270 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 STOML3Q8TAV4 291 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 COMMD5Q9GZQ3 224 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.1■□□□□ 0.653e-11■■■■■ 37.2
SNX3-203ENST00000368979 NBR2O15453 112 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 BRS3P32247 399 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 HNF4GQ14541 408 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 CYB5R2Q6BCY4 276 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 ST8SIA2Q92186 375 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 CLCC1Q96S66 551 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 HIPK2Q9H2X6 1198 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 FBXL15Q9H469 300 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 NDUFA4L2Q9NRX3 87 aa19.1■□□□□ 0.65
SNX3-203ENST00000368979 STRAPQ9Y3F4 350 aaKnown RBP19.1■□□□□ 0.65
SNX3-203ENST00000368979 PRRC2AP48634 2157 aaKnown RBP19.09■□□□□ 0.65
SNX3-203ENST00000368979 UNC79Q9P2D8 2635 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 A0A0U1RQK1 487 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 OPN1MWP04001 364 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 METTL15P1P0C7V9 234 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 OPN1MW2P0DN77 364 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 OPN1MW3P0DN78 364 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 PJVKQ0ZLH3 352 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 HAPLN4Q86UW8 402 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 PPP1R27Q86WC6 154 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 STPG2Q8N412 459 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 ZNF680Q8NEM1 530 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 OR1L8Q8NGR8 309 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 MEGF9Q9H1U4 602 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 WFDC1Q9HC57 220 aa19.09■□□□□ 0.65
SNX3-203ENST00000368979 MAS1LP35410 378 aa19.08■□□□□ 0.64
SNX3-203ENST00000368979 EXOSC2Q13868 293 aaKnown RBP19.08■□□□□ 0.64
SNX3-203ENST00000368979 FAM120AOSQ5T036 256 aa19.08■□□□□ 0.64
SNX3-203ENST00000368979 RPL7L1Q6DKI1 246 aaKnown RBP19.08■□□□□ 0.64
SNX3-203ENST00000368979 ZNF767PQ75MW2 155 aa19.08■□□□□ 0.64
SNX3-203ENST00000368979 CIARTQ8N365 385 aaPredicted RBP19.08■□□□□ 0.64
SNX3-203ENST00000368979 PLEKHA3Q9HB20 300 aa19.08■□□□□ 0.64
SNX3-203ENST00000368979 HEYLQ9NQ87 328 aaPredicted RBP19.08■□□□□ 0.64
SNX3-203ENST00000368979 CGB1A6NKQ9 187 aa19.07■□□□□ 0.64
SNX3-203ENST00000368979 C15orf62A8K5M9 175 aa19.07■□□□□ 0.64
SNX3-203ENST00000368979 PMS2P5A8MQ11 134 aa19.07■□□□□ 0.64
SNX3-203ENST00000368979 E7EUB6 86 aa19.07■□□□□ 0.64
SNX3-203ENST00000368979 INS-IGF2F8WCM5 200 aa19.07■□□□□ 0.64
SNX3-203ENST00000368979 FAM106CPP0CH98 169 aa19.07■□□□□ 0.64
SNX3-203ENST00000368979 TMEM11P17152 192 aa19.07■□□□□ 0.64
SNX3-203ENST00000368979 DYNLT3P51808 116 aa19.07■□□□□ 0.64
SNX3-203ENST00000368979 C10orf55Q5SWW7 151 aa19.07■□□□□ 0.64
SNX3-203ENST00000368979 TMEM217Q8N7C4 229 aa19.07■□□□□ 0.64
SNX3-203ENST00000368979 OR5C1Q8NGR4 320 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms