RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 CHRNB4P30926 498 aa8.84□□□□□ -0.99
TPM3-212ENST00000368533 RPS16P62249 146 aaKnown RBP8.84□□□□□ -0.99
TPM3-212ENST00000368533 H1FOOQ8IZA3 346 aaPredicted RBP8.84□□□□□ -0.99
TPM3-212ENST00000368533 LEAP2Q969E1 77 aa8.84□□□□□ -0.99
TPM3-212ENST00000368533 GCM1Q9NP62 436 aa8.84□□□□□ -0.99
TPM3-212ENST00000368533 DYNLRB1Q9NP97 96 aa8.84□□□□□ -0.99
TPM3-212ENST00000368533 IGKV1D-17A0A075B6S4 117 aa8.84□□□□□ -0.99
TPM3-212ENST00000368533 SYNGR2O43760 224 aa8.84□□□□□ -0.99
TPM3-212ENST00000368533 IL6RP08887 468 aaPredicted RBP8.84□□□□□ -0.99
TPM3-212ENST00000368533 PRB3Q04118 309 aaPredicted RBP8.84□□□□□ -0.99
TPM3-212ENST00000368533 BAXQ07812 192 aa8.84□□□□□ -0.99
TPM3-212ENST00000368533 UTF1Q5T230 341 aa8.84□□□□□ -0.99
TPM3-212ENST00000368533 OR52L2PQ8NGH6 319 aa8.84□□□□□ -0.99
TPM3-212ENST00000368533 CCL13Q99616 98 aa8.84□□□□□ -0.99
TPM3-212ENST00000368533 TUBG2Q9NRH3 451 aa8.84□□□□□ -0.99
TPM3-212ENST00000368533 AURKAIP1Q9NWT8 199 aaPredicted RBP8.84□□□□□ -0.99
TPM3-212ENST00000368533 TRBV24-1A0A075B6N3 115 aa8.83□□□□□ -1
TPM3-212ENST00000368533 TRAV34A0A0B4J273 112 aa8.83□□□□□ -1
TPM3-212ENST00000368533 KIR2DL5BA0A0G2JN68 375 aa8.83□□□□□ -1
TPM3-212ENST00000368533 KIR2DL5BA0A0G2JPC4 375 aa8.83□□□□□ -1
TPM3-212ENST00000368533 DUXBA0A1W2PPF3 345 aa8.83□□□□□ -1
TPM3-212ENST00000368533 PPP5D1E7EU14 171 aa8.83□□□□□ -1
TPM3-212ENST00000368533 M0QZ24 198 aa8.83□□□□□ -1
TPM3-212ENST00000368533 CLDN1O95832 211 aa8.83□□□□□ -1
TPM3-212ENST00000368533 KRASP01116 189 aa8.83□□□□□ -1
TPM3-212ENST00000368533 HSPB1P04792 205 aaKnown RBP8.83□□□□□ -1
TPM3-212ENST00000368533 TMEM11P17152 192 aa8.83□□□□□ -1
TPM3-212ENST00000368533 PRDX2P32119 198 aa8.83□□□□□ -1
TPM3-212ENST00000368533 PAX9P55771 341 aa8.83□□□□□ -1
TPM3-212ENST00000368533 SMIM21Q3B7S5 101 aa8.83□□□□□ -1
TPM3-212ENST00000368533 CLEC2AQ6UVW9 174 aa8.83□□□□□ -1
TPM3-212ENST00000368533 KIR2DL5AQ8N109 375 aa8.83□□□□□ -1
TPM3-212ENST00000368533 GBGT1Q8N5D6 347 aa8.83□□□□□ -1
TPM3-212ENST00000368533 FAM216BQ8N7L0 139 aa8.83□□□□□ -1
TPM3-212ENST00000368533 COQ2Q96H96 371 aa8.83□□□□□ -1
TPM3-212ENST00000368533 MS4A10Q96PG2 267 aa8.83□□□□□ -1
TPM3-212ENST00000368533 KCNIP1Q9NZI2 227 aa8.83□□□□□ -1
TPM3-212ENST00000368533 VAX2Q9UIW0 290 aa8.83□□□□□ -1
TPM3-212ENST00000368533 POLQO75417 2590 aa8.83□□□□□ -1
TPM3-212ENST00000368533 SHISA9B4DS77 424 aa8.83□□□□□ -1
TPM3-212ENST00000368533 HMGB3O15347 200 aaKnown RBP8.83□□□□□ -1
TPM3-212ENST00000368533 RND2P52198 227 aa8.83□□□□□ -1
TPM3-212ENST00000368533 TAS2R30P59541 319 aa8.83□□□□□ -1
TPM3-212ENST00000368533 ZNF506Q5JVG8 444 aa8.83□□□□□ -1
TPM3-212ENST00000368533 OR13A1Q8NGR1 328 aa8.83□□□□□ -1
TPM3-212ENST00000368533 RAB40CQ96S21 281 aa8.83□□□□□ -1
TPM3-212ENST00000368533 C11orf1Q9H5F2 150 aa8.83□□□□□ -1
TPM3-212ENST00000368533 SRD5A3Q9H8P0 318 aa8.83□□□□□ -1
TPM3-212ENST00000368533 WIPI2Q9Y4P8 454 aa8.83□□□□□ -1
TPM3-212ENST00000368533 IGLV3-9A0A075B6K5 115 aa8.83□□□□□ -1
TPM3-212ENST00000368533 C20orf202A1L168 122 aa8.83□□□□□ -1
TPM3-212ENST00000368533 ZNF816Q0VGE8 651 aaPredicted RBP8.83□□□□□ -1
TPM3-212ENST00000368533 ZNF146Q15072 292 aa8.83□□□□□ -1
TPM3-212ENST00000368533 SRSF7Q16629 238 aaKnown RBP eCLIP8.83□□□□□ -13e-11■■■■□ 20.4
TPM3-212ENST00000368533 LINC00596Q86U02 117 aa8.83□□□□□ -1
TPM3-212ENST00000368533 ODF3L1Q8IXM7 274 aa8.83□□□□□ -1
TPM3-212ENST00000368533 FAM169BQ8N8A8 192 aa8.83□□□□□ -1
TPM3-212ENST00000368533 VSIRQ9H7M9 311 aa8.83□□□□□ -1
TPM3-212ENST00000368533 CISD1Q9NZ45 108 aaKnown RBP8.83□□□□□ -1
TPM3-212ENST00000368533 RAI1Q7Z5J4 1906 aaPredicted RBP8.82□□□□□ -1
TPM3-212ENST00000368533 A0A1B0GW64 132 aa8.82□□□□□ -1
TPM3-212ENST00000368533 GRIFINA4D1Z8 144 aa8.82□□□□□ -1
TPM3-212ENST00000368533 CEBPZOSA8MTT3 80 aa8.82□□□□□ -1
TPM3-212ENST00000368533 HBE1P02100 147 aa8.82□□□□□ -1
TPM3-212ENST00000368533 FAM3BP58499 235 aaPredicted RBP8.82□□□□□ -1
TPM3-212ENST00000368533 Q8IYB0 196 aa8.82□□□□□ -1
TPM3-212ENST00000368533 STPG4Q8N801 248 aa8.82□□□□□ -1
TPM3-212ENST00000368533 RPUSD4Q96CM3 377 aaKnown RBP8.82□□□□□ -1
TPM3-212ENST00000368533 ABHD14BQ96IU4 210 aa8.82□□□□□ -1
TPM3-212ENST00000368533 FAM234AQ9H0X4 552 aa8.82□□□□□ -1
TPM3-212ENST00000368533 RNF115Q9Y4L5 304 aa8.82□□□□□ -1
TPM3-212ENST00000368533 OPN1MWP04001 364 aa8.82□□□□□ -1
TPM3-212ENST00000368533 CD3EP07766 207 aa8.82□□□□□ -1
TPM3-212ENST00000368533 OPN1MW2P0DN77 364 aa8.82□□□□□ -1
TPM3-212ENST00000368533 OPN1MW3P0DN78 364 aa8.82□□□□□ -1
TPM3-212ENST00000368533 CDKN1AP38936 164 aa8.82□□□□□ -1
TPM3-212ENST00000368533 TESK1Q15569 626 aa8.82□□□□□ -1
TPM3-212ENST00000368533 ZNF787Q6DD87 383 aa8.82□□□□□ -1
TPM3-212ENST00000368533 ZNF497Q6ZNH5 498 aa8.82□□□□□ -1
TPM3-212ENST00000368533 FAM90A1Q86YD7 464 aa8.82□□□□□ -1
TPM3-212ENST00000368533 LYG1Q8N1E2 194 aa8.82□□□□□ -1
TPM3-212ENST00000368533 VN1R17PQ8TDU5 208 aa8.82□□□□□ -1
TPM3-212ENST00000368533 NINJ1Q92982 152 aa8.82□□□□□ -1
TPM3-212ENST00000368533 SAP30LQ9HAJ7 183 aa8.82□□□□□ -1
TPM3-212ENST00000368533 SDF2L1Q9HCN8 221 aa8.82□□□□□ -1
TPM3-212ENST00000368533 RPRMQ9NS64 109 aa8.82□□□□□ -1
TPM3-212ENST00000368533 LIN7CQ9NUP9 197 aaKnown RBP8.82□□□□□ -1
TPM3-212ENST00000368533 CELSR2Q9HCU4 2923 aa8.81□□□□□ -1
TPM3-212ENST00000368533 C12orf77C9JDV5 145 aa8.81□□□□□ -1
TPM3-212ENST00000368533 M0QZK8 103 aa8.81□□□□□ -1
TPM3-212ENST00000368533 TMPRSS2O15393 492 aa8.81□□□□□ -1
TPM3-212ENST00000368533 GGCTO75223 188 aaKnown RBP8.81□□□□□ -1
TPM3-212ENST00000368533 IGKV1-39P01597 117 aa8.81□□□□□ -1
TPM3-212ENST00000368533 IGKV1D-39P04432 117 aa8.81□□□□□ -1
TPM3-212ENST00000368533 HBG1P69891 147 aa8.81□□□□□ -1
TPM3-212ENST00000368533 HBG2P69892 147 aa8.81□□□□□ -1
TPM3-212ENST00000368533 MALRD1Q5VYJ5 2156 aa8.81□□□□□ -1
TPM3-212ENST00000368533 UBE2L5PA0A1B0GUS4 154 aa8.81□□□□□ -1
TPM3-212ENST00000368533 CLEC18AA5D8T8 446 aa8.81□□□□□ -1
TPM3-212ENST00000368533 SRRM5B3KS81 715 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms