RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 KRTAP10-3P60369 221 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 ANKRD55Q3KP44 614 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 LYG2Q86SG7 212 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 LGI3Q8N145 548 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 SLC35G3Q8N808 338 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 LFNGQ8NES3 379 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 OR4A16Q8NH70 328 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 CHPT1Q8WUD6 406 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 WFDC12Q8WWY7 111 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 SRSF12Q8WXF0 261 aaKnown RBP10.93□□□□□ -0.66
TPM3-211ENST00000368531 TMEM56Q96MV1 263 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 HINT2Q9BX68 163 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 COMMD5Q9GZQ3 224 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 WNT10AQ9GZT5 417 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 TMEM56-RWDD3S4R434 201 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 TNCP24821 2201 aa10.93□□□□□ -0.66
TPM3-211ENST00000368531 A0A1W2PN81 502 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 HMX3A6NHT5 357 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 E7EUB6 86 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 IGF1P05019 195 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 IL6RP08887 468 aaPredicted RBP10.92□□□□□ -0.66
TPM3-211ENST00000368531 MAS1LP35410 378 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 CHRNA7P36544 502 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 RPL27AP46776 148 aaKnown RBP10.92□□□□□ -0.66
TPM3-211ENST00000368531 UBE2MP61081 183 aaKnown RBP10.92□□□□□ -0.66
TPM3-211ENST00000368531 SLC35B1P78383 322 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 TMEM267Q0VDI3 215 aaPredicted RBP10.92□□□□□ -0.66
TPM3-211ENST00000368531 DHRS2Q13268 280 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 DCTN2Q13561 401 aaKnown RBP10.92□□□□□ -0.66
TPM3-211ENST00000368531 KRTAP21-3Q3LHN1 58 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 PLET1Q6UQ28 207 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 LYZL2Q7Z4W2 148 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 SGMS2Q8NHU3 365 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 GPR146Q96CH1 333 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 SEC22CQ9BRL7 303 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 OR51B2Q9Y5P1 312 aa10.92□□□□□ -0.66
TPM3-211ENST00000368531 TEX50A0A1B0GTY4 177 aa10.91□□□□□ -0.66
TPM3-211ENST00000368531 DBX1A6NMT0 343 aa10.91□□□□□ -0.66
TPM3-211ENST00000368531 CD28P10747 220 aa10.91□□□□□ -0.66
TPM3-211ENST00000368531 SRPXP78539 464 aa10.91□□□□□ -0.66
TPM3-211ENST00000368531 LCNL1Q6ZST4 164 aa10.91□□□□□ -0.66
TPM3-211ENST00000368531 DUSP18Q8NEJ0 188 aa10.91□□□□□ -0.66
TPM3-211ENST00000368531 OR5T1Q8NG75 326 aa10.91□□□□□ -0.66
TPM3-211ENST00000368531 QTRT1Q9BXR0 403 aaKnown RBP10.91□□□□□ -0.66
TPM3-211ENST00000368531 GON7Q9BXV9 100 aa10.91□□□□□ -0.66
TPM3-211ENST00000368531 FBN1P35555 2871 aaKnown RBP10.9□□□□□ -0.66
TPM3-211ENST00000368531 INMT-MINDY4F8WBC2 141 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 FBXO24O75426 580 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 NXPH3O95157 252 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 HOXB5P09067 269 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 P0C879 139 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 SPINK9Q5DT21 86 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 KHDC1LQ5JSQ8 128 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 Q6ZRM9 215 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 UXS1Q8NBZ7 420 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 COQ8AQ8NI60 647 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 IL22RA2Q969J5 263 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 SPIN2AQ99865 258 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 SPIN2BQ9BPZ2 258 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 ALX4Q9H161 411 aaPredicted RBP10.9□□□□□ -0.66
TPM3-211ENST00000368531 PALMDQ9NP74 551 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 ZNF355PQ9NSJ1 428 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 CACNG5Q9UF02 275 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 PRNDQ9UKY0 176 aa10.9□□□□□ -0.66
TPM3-211ENST00000368531 A0A0B4J293 547 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 A0A0B4J2A0 478 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 A0A1B0GW64 132 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 CGB1A6NKQ9 187 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 C15orf61A6NNL5 157 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 DUS4LO95620 317 aaKnown RBP10.89□□□□□ -0.67
TPM3-211ENST00000368531 REG1AP05451 166 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 TRAPPC2P0DI81 140 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 TRAPPC2BP0DI82 140 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 PF4V1P10720 104 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 MECP2P51608 486 aaKnown RBP10.89□□□□□ -0.67
TPM3-211ENST00000368531 AKIRIN2Q53H80 203 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 ASPHD1Q5U4P2 390 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 OR10W1Q8NGF6 305 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 OR4X2Q8NGF9 303 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 OR1L8Q8NGR8 309 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 LSM10Q969L4 123 aaKnown RBP10.89□□□□□ -0.67
TPM3-211ENST00000368531 MS4A10Q96PG2 267 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 ZNF747Q9BV97 191 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 FKBP11Q9NYL4 201 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 SHPKQ9UHJ6 478 aa10.89□□□□□ -0.67
TPM3-211ENST00000368531 FOXA2Q9Y261 457 aaPredicted RBP10.89□□□□□ -0.67
TPM3-211ENST00000368531 A0A1W2PRX2 142 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 TCRBV4S1A1TA0A5B7 111 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 TEX22C9J3V5 150 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 ST8SIA3O43173 380 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 SOX15O60248 233 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 ADAP1O75689 374 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 IFNA17P01571 189 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 AREGP15514 252 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 PPIFP30405 207 aaKnown RBP10.88□□□□□ -0.67
TPM3-211ENST00000368531 CRIP2P52943 208 aaPredicted RBP10.88□□□□□ -0.67
TPM3-211ENST00000368531 CFHR3Q02985 330 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 C19orf54Q5BKX5 351 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 TCTEX1D4Q5JR98 221 aa10.88□□□□□ -0.67
TPM3-211ENST00000368531 TEX38Q6PEX7 206 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms