RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 PLSCR4Q9NRQ2 329 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 PLXND1Q9Y4D7 1925 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 LILRA1O75019 489 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 FCGR2BP31994 310 aaPredicted RBP10.33□□□□□ -0.76
PTPRK-203ENST00000368207 TBR1Q16650 682 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 OR4A47Q6IF82 309 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 DNM1P46Q6ZS02 220 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 DNAJC4Q9NNZ3 241 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 SH2D7A6NKC9 451 aaPredicted RBP10.33□□□□□ -0.76
PTPRK-203ENST00000368207 MOSP00540 346 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 TFPI2P48307 235 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 PDLIM4P50479 330 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 ZNF146Q15072 292 aa10.33□□□□□ -0.76
PTPRK-203ENST00000368207 MRPL20Q9BYC9 149 aaKnown RBP10.33□□□□□ -0.76
PTPRK-203ENST00000368207 NABP2Q9BQ15 211 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 S4R3C0 116 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 MFAP2P55001 183 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 FAM3BP58499 235 aaPredicted RBP10.32□□□□□ -0.76
PTPRK-203ENST00000368207 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 ZNF497Q6ZNH5 498 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 PRO1933Q9H354 126 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 H0YIZ8 118 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 TM4SF5O14894 197 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 HIST1H1EP10412 219 aaKnown RBP10.32□□□□□ -0.76
PTPRK-203ENST00000368207 HIST3H3Q16695 136 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 PCSK4Q6UW60 755 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 CCL19Q99731 98 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 VAMP8Q9BV40 100 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 DPM3Q9P2X0 92 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 WDR87Q6ZQQ6 2873 aa10.32□□□□□ -0.76
PTPRK-203ENST00000368207 E9PLN8 166 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 RRHO14718 337 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 LDLRAD4O15165 306 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 C8orf88P0DMB2 117 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 FAM166AQ6J272 317 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 RCC1LQ96I51 464 aaKnown RBP10.31□□□□□ -0.76
PTPRK-203ENST00000368207 VKORC1Q9BQB6 163 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 RNF126Q9BV68 326 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 TIMP3P35625 211 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 BPIFA4PQ86YQ2 179 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 STPG3Q8N7X2 389 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 OSR1Q8TAX0 266 aaPredicted RBP10.31□□□□□ -0.76
PTPRK-203ENST00000368207 FOXH1O75593 365 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 IGHV1-46P01743 117 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 MFAP4P55083 255 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 HGFACQ04756 655 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 NHLRC2Q8NBF2 726 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 SSBP3Q9BWW4 388 aaPredicted RBP10.31□□□□□ -0.76
PTPRK-203ENST00000368207 ZNF581Q9P0T4 197 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 LINC00312Q9Y6C7 94 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 PTPRQQ9UMZ3 2332 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 IQCJQ1A5X6 159 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 HLA-DRB5Q30154 266 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 FAM90A1Q86YD7 464 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 PLXNA2O75051 1894 aa10.31□□□□□ -0.76
PTPRK-203ENST00000368207 IGHV3OR16-13A0A075B7E8 117 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 IGHV3-74A0A0B4J1X5 117 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 CGB1A6NKQ9 187 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 PSPNO60542 156 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 RAMP3O60896 148 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 CRYBB3P26998 211 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 ZNF273Q14593 569 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 RPL30P62888 115 aaKnown RBP10.3□□□□□ -0.76
PTPRK-203ENST00000368207 TFF3Q07654 80 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 WDR25Q64LD2 544 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-203ENST00000368207 TMEM56-RWDD3S4R434 201 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 OR5AL1P0C617 328 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 NAT1P18440 290 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 MEF2CQ06413 473 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-203ENST00000368207 LRRC75BQ2VPJ9 315 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 TECTAO75443 2155 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 SAA2-SAA4A0A096LPE2 208 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 SAA2P0DJI9 122 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-203ENST00000368207 OR51G1Q8NGK1 321 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 GOLT1BQ9Y3E0 138 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 LRRK1Q38SD2 2015 aa10.3□□□□□ -0.76
PTPRK-203ENST00000368207 MORN2Q502X0 79 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 GBGT1Q8N5D6 347 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 LHFPL5Q8TAF8 219 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 NEU4Q8WWR8 484 aaPredicted RBP10.29□□□□□ -0.76
PTPRK-203ENST00000368207 TRAV34A0A0B4J273 112 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 NPIPB11E5RHQ5 1161 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 OTX1P32242 354 aaPredicted RBP10.29□□□□□ -0.76
PTPRK-203ENST00000368207 NHLH1Q02575 133 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 KLHDC1Q8N7A1 406 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 GTF3AQ92664 365 aaKnown RBP10.29□□□□□ -0.76
PTPRK-203ENST00000368207 NPCDR1Q9BY65 106 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 IGKV1D-33P01593 117 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 IGKV1-33P01594 117 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 CD24P25063 80 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 RIGQ13278 110 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 Q6ZS92 163 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 PSMG3Q9BT73 122 aaPredicted RBP10.29□□□□□ -0.76
PTPRK-203ENST00000368207 PROK2Q9HC23 129 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 SLC25A15Q9Y619 301 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 SPSB4Q96A44 273 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 WFIKKN1Q96NZ8 548 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 PARLQ9H300 379 aa10.29□□□□□ -0.76
PTPRK-203ENST00000368207 DENND4CQ5VZ89 1909 aa10.28□□□□□ -0.76
PTPRK-203ENST00000368207 TRGC2P03986 189 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms