RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 CXorf66Q5JRM2 361 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 C10orf113Q5VZT2 155 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 C1orf162Q8NEQ5 155 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 TRAV39A0A0B4J263 110 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 IFNL4K9M1U5 179 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 FTH1P19P0C7X4 201 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 MAS1LP35410 378 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 ATP5IP56385 69 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 LRRC29Q8WV35 223 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 ABHD14AQ9BUJ0 271 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 QTRT1Q9BXR0 403 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 CEACAM1P13688 526 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 STPG1Q5TH74 334 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 Q6ZSR3 168 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 ZIC4Q8N9L1 334 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 TMEM170AQ8WVE7 144 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 TAF15Q92804 592 aaKnown RBP eCLIP4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 HILPDAQ9Y5L2 63 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 CADP27708 2225 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 APOMO95445 188 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 MGPP08493 103 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 LYZP61626 148 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 VMA21Q3ZAQ7 101 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 ZNF818PQ6ZRF7 136 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 GCSAMQ8N6F7 178 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 WDR31Q8NA23 367 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 OR2Z1Q8NG97 314 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 KLHDC3Q9BQ90 382 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 PLSCR4Q9NRQ2 329 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 TRBV6-6A0A0A6YYG2 114 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 PATE3B3GLJ2 98 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 SNAI2O43623 268 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 LGALS3P17931 250 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 SUPT4H1P63272 117 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 UBE2V1Q13404 147 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 BHLHA15Q7RTS1 189 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 HIST3H2BBQ8N257 126 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 FGFRL1Q8N441 504 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 JPT1Q9UK76 154 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 HCFC1P51610 2035 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 hADV38S2A0JD32 116 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 M0R1B8 84 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 MGST3O14880 152 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 IGLV3-1P01715 115 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 TYMSP04818 313 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 LCN2P80188 198 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 ID3Q02535 119 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 MMDQ15546 238 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 TIMM23BQ5SRD1 257 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 ORAOV1Q8WV07 137 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 DIRC2Q96SL1 478 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 A8MWL6 223 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 WNT5AP41221 380 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 TDGF1P3P51864 188 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 NEUROG1Q92886 237 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 C11orf68Q9H3H3 251 aaKnown RBP4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 NPVFQ9HCQ7 196 aa4.56□□□□□ -1.68
CDC42BPA-204ENST00000366767 ZNF324O75467 553 aaPredicted RBP4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 FXYD3Q14802 87 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 PGLYRP4Q96LB8 373 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 TMEM208Q9BTX3 173 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 CLEC5AQ9NY25 188 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 IGHV3-64DA0A0J9YX35 117 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 TNFSF13O75888 250 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 LYZL6O75951 148 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 OR4A8P0C604 315 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 CBLN1P23435 193 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 TRIP6Q15654 476 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 PRNTQ86SH4 94 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 VSTM2AQ8TAG5 236 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 RNF166Q96A37 237 aaPredicted RBP4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 TMEM186Q96B77 213 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 IL36RNQ9UBH0 155 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 CLN8Q9UBY8 286 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 DYSFO75923 2080 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 DEFB108AA8MXU0 73 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 PRR33A8MZF0 331 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 LGALS4P56470 323 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 TMEM95Q3KNT9 176 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 MRGPRDQ8TDS7 321 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 GTSF1LQ9H1H1 148 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 RBKSQ9H477 322 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 SMOC1Q9H4F8 434 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 LPAR2Q9HBW0 351 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 TRAV30A0A087WSZ9 112 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 CLDN14O95500 239 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 SRSF3P84103 164 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 TEPPQ6URK8 271 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 PQLC2Q6ZP29 291 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 TTC9CQ8N5M4 171 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 OR4X1Q8NH49 305 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 HIST1H2BLQ99880 126 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 THYN1Q9P016 225 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 PRNDQ9UKY0 176 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 EML6Q6ZMW3 1958 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 RBFOX2O43251 390 aaKnown RBP eCLIP4.55□□□□□ -1.689e-6■■□□□ 11.7
CDC42BPA-204ENST00000366767 PRSS12P56730 875 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 HIST1H1AQ02539 215 aaPredicted RBP4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 LRRC75BQ2VPJ9 315 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 ACSF3Q4G176 576 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms