RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 MSNP26038 577 aaKnown RBP0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 CD40LGP29965 261 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 HAAOP46952 286 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 CDC34P49427 236 aaPredicted RBP0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 UBE2G2P60604 165 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 SKP1P63208 163 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 C10orf55Q5SWW7 151 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 CLEC6AQ6EIG7 209 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 TNFAIP8L2Q6P589 184 aaPredicted RBP0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 C5orf46Q6UWT4 87 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 PLEKHG7Q6ZR37 379 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 SLC51BQ86UW2 128 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 FAM9CQ8IZT9 166 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 OR8B3Q8NGG8 313 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 SGMS2Q8NHU3 365 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 SMIM19Q96E16 107 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 PACRGQ96M98 296 aaPredicted RBP0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 KCTD7Q96MP8 289 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 HES4Q9HCC6 221 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 EURLQ9NYK6 297 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 PRELID1Q9Y255 219 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 COQ4Q9Y3A0 265 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 TONSLQ96HA7 1378 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 ALPK2Q86TB3 2170 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 EIF4G1Q04637 1599 aaKnown RBP0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 SCN3AQ9NY46 2000 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 LAMB4A4D0S4 1761 aa0.4□□□□□ -2.35
RNU4-48P-201ENST00000365559 RAD50Q92878 1312 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 ZNF106Q9H2Y7 1883 aaKnown RBP0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 MYH10P35580 1976 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 EML5Q05BV3 1969 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 A0A1B0GW54 56 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 GOLGA8KD6RF30 607 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 F5H768 121 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 GOLGA8MH3BSY2 632 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 COCHO43405 550 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 SSNA1O43805 119 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 UBBP0CG47 229 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 RNASE3P12724 160 aaKnown RBP0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 DDTP30046 118 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 PPP1R1AQ13522 171 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 CST9Q5W186 159 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 SBSNQ6UWP8 590 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 HIST2H3AQ71DI3 136 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 COMMD7Q86VX2 200 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 TBC1D19Q8N5T2 526 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 TMEM251Q8N6I4 163 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 ZNF676Q8N7Q3 588 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 ZNF439Q8NDP4 499 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 OR2T27Q8NH04 317 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 HAVCR2Q8TDQ0 301 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 DRC3Q9H069 523 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 CXorf21Q9HAI6 301 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 IMP3Q9NV31 184 aaKnown RBP0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 PLEKHJ1Q9NW61 149 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 FKBP14Q9NWM8 211 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 ANAPC10Q9UM13 185 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 POLR1DQ9Y2S0 133 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 C15orf41Q9Y2V0 281 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 KIF15Q9NS87 1388 aa0.39□□□□□ -2.35
RNU4-48P-201ENST00000365559 ZFC3H1O60293 1989 aaKnown RBP0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 SCN10AQ9Y5Y9 1956 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 IGHV1-69-2A0A0G2JMI3 117 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 C1orf232A0A0U1RR37 186 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 TMEM212A6NML5 194 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 PFDN6O15212 129 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 LEPROTO15243 131 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 YEATS4O95619 227 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 HLA-DRAP01903 254 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 APOEP02649 317 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 TYMSP04818 313 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 REG1AP05451 166 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 TPM3P06753 285 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 MSMBP08118 114 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 CASQ1P31415 396 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 CD151P48509 253 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 RAB13P51153 203 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 BLVRAP53004 296 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 MED21Q13503 144 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 RSU1Q15404 277 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 BATFQ16520 125 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 FAM78BQ5VT40 261 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 PDPK2PQ6A1A2 396 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 SSX8Q7RTT4 187 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 KRTAP19-3Q7Z4W3 81 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 DHFR2Q86XF0 187 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 Q8N402 240 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 SLC22A24Q8N4F4 322 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 ZNF565Q8N9K5 539 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 OR5B17Q8NGF7 314 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 JOSD2Q8TAC2 188 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 CMTM5Q96DZ9 223 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 OR8D2Q9GZM6 311 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 FAM96AQ9H5X1 160 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 XAGE1AQ9HD64 81 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 GPR84Q9NQS5 396 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 DKKL1Q9UK85 242 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 SNURFQ9Y675 71 aa0.38□□□□□ -2.35
RNU4-48P-201ENST00000365559 PXMP4Q9Y6I8 212 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms