RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 NIPSNAP2O75323 286 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 CIAO1O76071 339 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 CLPSP04118 112 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 ROS1P08922 2347 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 OR5G3P0C626 314 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 MYL12AP19105 171 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 RAP1GDS1P52306 607 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 NKX2-5P52952 324 aaPredicted RBP0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 TPI1P60174 286 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 RAB14P61106 215 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 RPL26P61254 145 aaKnown RBP0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 UBE2IP63279 158 aaKnown RBP0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 NUP160Q12769 1436 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 OR2F1Q13607 317 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 IMPG1Q17R60 797 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 C5orf46Q6UWT4 87 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 SLC35E3Q7Z769 313 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 GID4Q8IVV7 300 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 TESCQ96BS2 214 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 ERMAPQ96PL5 475 aaPredicted RBP0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 CHST6Q9GZX3 395 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 XAGE1AQ9HD64 81 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 RPL26L1Q9UNX3 145 aaKnown RBP0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 KIF13BQ9NQT8 1826 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 ADCY9O60503 1353 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 NCOA6Q14686 2063 aaPredicted RBP0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 MYH7BA7E2Y1 1941 aa0.68□□□□□ -2.3
RNU4-56P-201ENST00000364700 GLI3P10071 1580 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 HECW2Q9P2P5 1572 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 EML6Q6ZMW3 1958 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 TNRC6AQ8NDV7 1962 aaKnown RBP0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 IGKV1D-43A0A0B4J1Z2 117 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 A0A0D9SEW6 157 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 IBA57-AS1B1ANH7 110 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 H3BT86 120 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 H7C2G1 150 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 IFNA5P01569 189 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 HIST1H1EP10412 219 aaKnown RBP0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 SLCO1A2P46721 670 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 HINT1P49773 126 aaPredicted RBP0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 AQP4P55087 323 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 MAGOHP61326 146 aaKnown RBP0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 POLR2GP62487 172 aaKnown RBP eCLIP0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 RPL30P62888 115 aaKnown RBP0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 ERHP84090 104 aaKnown RBP0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 GNA12Q03113 381 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 RELAQ04206 551 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 GLO1Q04760 184 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 COA5Q86WW8 74 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 LRRC28Q86X40 367 aaPredicted RBP0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 SLC35B4Q969S0 331 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 C12orf43Q96C57 262 aaKnown RBP0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 DIRAS2Q96HU8 199 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 ARL5BQ96KC2 179 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 DRC3Q9H069 523 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 CYSTM1Q9H1C7 97 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 PARVGQ9HBI0 331 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 CISHQ9NSE2 258 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 FGFR1OP2Q9NVK5 253 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 RSL24D1Q9UHA3 163 aaKnown RBP0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 LHFPL6Q9Y693 200 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 HECW1Q76N89 1606 aa0.67□□□□□ -2.3
RNU4-56P-201ENST00000364700 EVC2Q86UK5 1308 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 TMEM269A0A1B0GVZ9 245 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 KCNK1O00180 336 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 TXNDC9O14530 226 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 DCTN3O75935 186 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 APOEP02649 317 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 C1QAP02745 245 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 FGF6P10767 208 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 PSMB8P28062 276 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 CCR7P32248 378 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 IFITM2Q01629 132 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 SLC38A11Q08AI6 406 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 PMAIP1Q13794 54 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 KISS1Q15726 138 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 Q1T7F1 81 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 OGFRL1Q5TC84 451 aaPredicted RBP0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 RPP25LQ8N5L8 163 aaKnown RBP0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 ZNF439Q8NDP4 499 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 OR8J2Q8NGG1 315 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 SLC7A6Q92536 515 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 KLK6Q92876 244 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 RETNLBQ9BQ08 111 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 SPZ1Q9BXG8 430 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 TP73-AS1Q9UF72 201 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 ANGPT4Q9Y264 503 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 TIMM22Q9Y584 194 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 KIF24Q5T7B8 1368 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 CACNA1BQ00975 2339 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 PLB1Q6P1J6 1458 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 TNRC6BQ9UPQ9 1833 aaKnown RBP0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 ANAPC1Q9H1A4 1944 aa0.66□□□□□ -2.3
RNU4-56P-201ENST00000364700 WRNQ14191 1432 aaPredicted RBP eCLIP0.65□□□□□ -2.3
RNU4-56P-201ENST00000364700 TGIF2-C20orf24A0A0A6YYL0 155 aa0.65□□□□□ -2.31
RNU4-56P-201ENST00000364700 I3L521 148 aa0.65□□□□□ -2.31
RNU4-56P-201ENST00000364700 AHSA1O95433 338 aa0.65□□□□□ -2.31
RNU4-56P-201ENST00000364700 IGKV1-5P01602 117 aa0.65□□□□□ -2.31
RNU4-56P-201ENST00000364700 SERPINA7P05543 415 aa0.65□□□□□ -2.31
RNU4-56P-201ENST00000364700 SRP19P09132 144 aaKnown RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms