RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 C9orf106Q8NAJ2 232 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 CCL11P51671 97 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 RPL31P62899 125 aaKnown RBP8.73□□□□□ -1.01
SMC3-201ENST00000361804 FXYD3Q14802 87 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 KCNIP4Q6PIL6 250 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 TMEM144Q7Z5S9 345 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 CISD2Q8N5K1 135 aaKnown RBP8.73□□□□□ -1.01
SMC3-201ENST00000361804 WDR31Q8NA23 367 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 DEFB108BQ8NET1 73 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 FAM216AQ8WUB2 273 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 MS4A10Q96PG2 267 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 MRPL37Q9BZE1 423 aaKnown RBP8.73□□□□□ -1.01
SMC3-201ENST00000361804 OPN3Q9H1Y3 402 aaPredicted RBP8.73□□□□□ -1.01
SMC3-201ENST00000361804 ZDHHC11Q9H8X9 412 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 C17orf112F2Z3M2 114 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 TM4SF5O14894 197 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 TCAPO15273 167 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 NKX2-8O15522 239 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 GFRA3O60609 400 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 CGAP01215 116 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 CD46P15529 392 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 PRDX2P32119 198 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 ACY3Q96HD9 319 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 TBX15Q96SF7 602 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 FAM103A1Q9BTL3 118 aaKnown RBP8.73□□□□□ -1.01
SMC3-201ENST00000361804 TMEM140Q9NV12 185 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 ZNF469Q96JG9 3925 aaPredicted RBP8.73□□□□□ -1.01
SMC3-201ENST00000361804 IGHV3-48P01763 117 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 GNG10P50151 68 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 KRTCAP3Q53RY4 240 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 TMEM164Q5U3C3 297 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 Q6ZWC4 215 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 NHLRC2Q8NBF2 726 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 LURAP1Q96LR2 239 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 TAAR6Q96RI8 345 aa8.73□□□□□ -1.01
SMC3-201ENST00000361804 MDFIC2A0A1B0GVS7 189 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 IGFBP2P18065 325 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 KITLGP21583 273 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 SRP14P37108 136 aaKnown RBP8.72□□□□□ -1.01
SMC3-201ENST00000361804 IER3P46695 156 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 LHFPL4Q7Z7J7 247 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 OR4P4Q8NGL7 312 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 SERF1AO75920 110 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 OR10J4P0C629 311 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 MORN2Q502X0 79 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 HES3Q5TGS1 186 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 TOMM20LQ6UXN7 152 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 MIR17HGQ75NE6 70 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 DOLPP1Q86YN1 238 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 CIB3Q96Q77 187 aaPredicted RBP8.72□□□□□ -1.01
SMC3-201ENST00000361804 C2orf88Q9BSF0 95 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 PAM16Q9Y3D7 125 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 RAI1Q7Z5J4 1906 aaPredicted RBP8.72□□□□□ -1.01
SMC3-201ENST00000361804 TANC2Q9HCD6 1990 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 NBPF19A0A087WUL8 3843 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 GCGP01275 180 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 IL6RP08887 468 aaPredicted RBP8.72□□□□□ -1.01
SMC3-201ENST00000361804 KIR2DL2P43627 348 aaPredicted RBP8.72□□□□□ -1.01
SMC3-201ENST00000361804 RELBQ01201 579 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 ZNF90Q03938 601 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 BATFQ16520 125 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 ZNF705AQ6ZN79 300 aaPredicted RBP8.72□□□□□ -1.01
SMC3-201ENST00000361804 CXXC4Q9H2H0 198 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 DCAF16Q9NXF7 216 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 PPIAL4AQ9Y536 164 aa8.72□□□□□ -1.01
SMC3-201ENST00000361804 SPINT2O43291 252 aa8.71□□□□□ -1.01
SMC3-201ENST00000361804 CA1P00915 261 aaPredicted RBP8.71□□□□□ -1.01
SMC3-201ENST00000361804 TYMSP04818 313 aa8.71□□□□□ -1.01
SMC3-201ENST00000361804 PRB4P10163 310 aaPredicted RBP8.71□□□□□ -1.01
SMC3-201ENST00000361804 VDAC2P45880 294 aaPredicted RBP8.71□□□□□ -1.01
SMC3-201ENST00000361804 SPCS3P61009 180 aa8.71□□□□□ -1.01
SMC3-201ENST00000361804 FAM214BQ7L5A3 538 aa8.71□□□□□ -1.01
SMC3-201ENST00000361804 STPG3Q8N7X2 389 aa8.71□□□□□ -1.01
SMC3-201ENST00000361804 RNASE7Q9H1E1 156 aaKnown RBP8.71□□□□□ -1.01
SMC3-201ENST00000361804 NAGKQ9UJ70 344 aa8.71□□□□□ -1.01
SMC3-201ENST00000361804 TCF19Q9Y242 345 aa8.71□□□□□ -1.01
SMC3-201ENST00000361804 CUL9Q8IWT3 2517 aa8.71□□□□□ -1.02
SMC3-201ENST00000361804 PRSS46E5RG02 174 aa8.71□□□□□ -1.02
SMC3-201ENST00000361804 VENTXO95231 258 aa8.71□□□□□ -1.02
SMC3-201ENST00000361804 TRIP6Q15654 476 aaKnown RBP8.71□□□□□ -1.02
SMC3-201ENST00000361804 EFNB3Q15768 340 aa8.71□□□□□ -1.02
SMC3-201ENST00000361804 ZBTB34Q8NCN2 500 aa8.71□□□□□ -1.02
SMC3-201ENST00000361804 GMPPAQ96IJ6 420 aaPredicted RBP8.71□□□□□ -1.02
SMC3-201ENST00000361804 HSD17B10Q99714 261 aaKnown RBP8.71□□□□□ -1.02
SMC3-201ENST00000361804 AKAP9Q99996 3911 aa8.71□□□□□ -1.02
SMC3-201ENST00000361804 SPRY3O43610 288 aa8.71□□□□□ -1.02
SMC3-201ENST00000361804 MMP23AO75900 390 aa8.71□□□□□ -1.02
SMC3-201ENST00000361804 MOGAT3Q86VF5 341 aa8.71□□□□□ -1.02
SMC3-201ENST00000361804 RPRMLQ8N4K4 120 aa8.71□□□□□ -1.02
SMC3-201ENST00000361804 IFI27L2Q9H2X8 130 aa8.71□□□□□ -1.02
SMC3-201ENST00000361804 ASCL3Q9NQ33 180 aa8.71□□□□□ -1.02
SMC3-201ENST00000361804 PDE6DO43924 150 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 STAG3L2P0CL84 134 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 STAG3L3P0CL85 134 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 ZNF83P51522 516 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 SMIM21Q3B7S5 101 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 OR10G8Q8NGN5 311 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 VN1R17PQ8TDU5 208 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 HSPB9Q9BQS6 159 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 KCNIP2Q9NS61 270 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms