RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 HLA-DQA1P01909 254 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 PF4P02776 101 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 IL4P05112 153 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 RELBQ01201 579 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 C20orf204Q6ZNR8 217 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 PPP1R27Q86WC6 154 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 TMEM133Q9H2Q1 129 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 ARPC1AQ92747 370 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 NPFFR1Q9GZQ6 430 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 ANK1P16157 1881 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 TMEM250H0YL14 139 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 REG1AP05451 166 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 SCGB1C2P0DMR2 95 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 LY6DQ14210 128 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 ZNF497Q6ZNH5 498 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 C21orf62Q9NYP8 219 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 MBD3L4A6NDZ8 208 aaPredicted RBP11.32□□□□□ -0.6
LDB3-202ENST00000361373 MBD3L3A6NE82 208 aaPredicted RBP11.32□□□□□ -0.6
LDB3-202ENST00000361373 MBD3L5A6NJ08 208 aaPredicted RBP11.32□□□□□ -0.6
LDB3-202ENST00000361373 HAX1O00165 279 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 KLK2P20151 261 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 CD81P60033 236 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 MBD3L2Q8NHZ7 208 aaPredicted RBP11.32□□□□□ -0.6
LDB3-202ENST00000361373 IGKV1-9A0A0C4DH69 117 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 ARL14EPLP0DKL9 152 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 AREGP15514 252 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 TWIST1Q15672 202 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 SRSF7Q16629 238 aaKnown RBP eCLIP11.32□□□□□ -0.6
LDB3-202ENST00000361373 CBLN2Q8IUK8 224 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 HIST1H2BAQ96A08 127 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 C17orf98A8MV24 154 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 SMAD7O15105 426 aaKnown RBP11.32□□□□□ -0.6
LDB3-202ENST00000361373 SIGLEC5O15389 551 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 C1QL1O75973 258 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 ZNF250P15622 560 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 CDKN1AP38936 164 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 MEOX2P50222 304 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 CLDND2Q8NHS1 167 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 LYZL4Q96KX0 146 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 FBXL7Q9UJT9 491 aa11.32□□□□□ -0.6
LDB3-202ENST00000361373 PTBP3O95758 552 aaKnown RBP11.31□□□□□ -0.6
LDB3-202ENST00000361373 GAS1P54826 345 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 NUTF2P61970 127 aaKnown RBP11.31□□□□□ -0.6
LDB3-202ENST00000361373 Q0VFX4 171 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 ST6GALNAC3Q8NDV1 305 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 OR4B1Q8NGF8 309 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 MRPL20Q9BYC9 149 aaKnown RBP11.31□□□□□ -0.6
LDB3-202ENST00000361373 CLPSP04118 112 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 EFNB1P98172 346 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 C2orf68Q2NKX9 166 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 PLPPR1Q8TBJ4 325 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 EAF1Q96JC9 268 aaPredicted RBP11.31□□□□□ -0.6
LDB3-202ENST00000361373 DUX5Q96PT3 197 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 IGHV3OR16-10A0A075B7F0 116 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 CXorf65A6NEN9 183 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 GCGP01275 180 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 NABP1Q96AH0 204 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 MESP1Q9BRJ9 268 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 CACNA1HO95180 2353 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 GPX4P36969 197 aaPredicted RBP11.31□□□□□ -0.6
LDB3-202ENST00000361373 NHLRC3Q5JS37 347 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 GLRX5Q86SX6 157 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 OR10S1Q8NGN2 331 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 CACNA1GO43497 2377 aa11.31□□□□□ -0.6
LDB3-202ENST00000361373 SRRM5B3KS81 715 aa11.3□□□□□ -0.6
LDB3-202ENST00000361373 NBR2O15453 112 aa11.3□□□□□ -0.6
LDB3-202ENST00000361373 IGHV1-46P01743 117 aa11.3□□□□□ -0.6
LDB3-202ENST00000361373 TRGC1P0CF51 173 aa11.3□□□□□ -0.6
LDB3-202ENST00000361373 PHLDA3Q9Y5J5 127 aa11.3□□□□□ -0.6
LDB3-202ENST00000361373 GCHFRP30047 84 aa11.3□□□□□ -0.6
LDB3-202ENST00000361373 FAM169BQ8N8A8 192 aa11.3□□□□□ -0.6
LDB3-202ENST00000361373 FNDC1Q4ZHG4 1894 aaPredicted RBP11.3□□□□□ -0.6
LDB3-202ENST00000361373 EFNA4P52798 201 aa11.3□□□□□ -0.6
LDB3-202ENST00000361373 CX3CL1P78423 397 aa11.3□□□□□ -0.6
LDB3-202ENST00000361373 FOXF2Q12947 444 aa11.3□□□□□ -0.6
LDB3-202ENST00000361373 RTBDNQ9BSG5 229 aaPredicted RBP11.3□□□□□ -0.6
LDB3-202ENST00000361373 FBLL1A6NHQ2 334 aaKnown RBP11.3□□□□□ -0.6
LDB3-202ENST00000361373 GPX1P07203 203 aa11.3□□□□□ -0.6
LDB3-202ENST00000361373 MPZP25189 248 aa11.3□□□□□ -0.6
LDB3-202ENST00000361373 AURKAIP1Q9NWT8 199 aaPredicted RBP11.3□□□□□ -0.6
LDB3-202ENST00000361373 CD99P14209 185 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 ANOS1P23352 680 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 SLC25A15Q9Y619 301 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 FAM90A9PA6NNJ1 464 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 IL6RP08887 468 aaPredicted RBP11.29□□□□□ -0.6
LDB3-202ENST00000361373 DLX1P56177 255 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 MORN2Q502X0 79 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 SCGB1D4Q6XE38 83 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 SLC25A28Q96A46 364 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 TEX45Q8NA69 505 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 SDHCQ99643 169 aaPredicted RBP11.29□□□□□ -0.6
LDB3-202ENST00000361373 VWA8A3KMH1 1905 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 PROB1E7EW31 1015 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 UPK2O00526 184 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 SMUG1Q53HV7 270 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 TMEM177Q53S58 311 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 LINC00305Q7Z4B0 112 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 NPCDR1Q9BY65 106 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 PRSS22Q9GZN4 317 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 CKS2P33552 79 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms