RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ZNF726P1Q15940 193 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 TMEM14EPQ6UXP3 125 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 ZNF600Q6ZNG1 722 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 TCTEX1D1Q8N7M0 179 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 EDARADDQ8WWZ3 215 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 H1FXQ92522 213 aaKnown RBP10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 GGACTQ9BVM4 153 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 GNG12Q9UBI6 72 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 CTSZQ9UBR2 303 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 JPT1Q9UK76 154 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 LINC00312Q9Y6C7 94 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 KBTBD11-OT1A0A1B0GTJ5 212 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 FGF8P55075 233 aaPredicted RBP10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 TNFRSF9Q07011 255 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 LTC4SQ16873 150 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 CENPVQ7Z7K6 275 aaPredicted RBP10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 CORO2AQ92828 525 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 LHX4Q969G2 390 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 GAL3ST2Q9H3Q3 398 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 RBKSQ9H477 322 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 CLN8Q9UBY8 286 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 HSPB7Q9UBY9 170 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 CSMD2Q7Z408 3487 aa10.8□□□□□ -0.68
SQSTM1-201ENST00000360718 IGHV3-43A0A0B4J1X8 118 aa10.8□□□□□ -0.68
SQSTM1-201ENST00000360718 F2RL2O00254 374 aa10.8□□□□□ -0.68
SQSTM1-201ENST00000360718 PPP1R2P9O14990 202 aa10.8□□□□□ -0.68
SQSTM1-201ENST00000360718 IGHV3-43DP0DP04 118 aa10.8□□□□□ -0.68
SQSTM1-201ENST00000360718 COL8A1P27658 744 aa10.8□□□□□ -0.68
SQSTM1-201ENST00000360718 EFNA4P52798 201 aa10.8□□□□□ -0.68
SQSTM1-201ENST00000360718 TMEM30BQ3MIR4 351 aa10.8□□□□□ -0.68
SQSTM1-201ENST00000360718 TCF23Q7RTU1 214 aa10.8□□□□□ -0.68
SQSTM1-201ENST00000360718 DOPEY2Q9Y3R5 2298 aa10.8□□□□□ -0.68
SQSTM1-201ENST00000360718 UBE2L5PA0A1B0GUS4 154 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 HIST1H2BKO60814 126 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 NDUFS6O75380 124 aaKnown RBP10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 TRGC2P03986 189 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 HIST1H2BJP06899 126 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 HIST1H2BOP23527 126 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 HIST1H2BBP33778 126 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 ELLP55199 621 aaPredicted RBP10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 HIST1H2BDP58876 126 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 HIST1H2BCP62807 126 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 HIST2H2BEQ16778 126 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 OR8G2PQ6IF36 304 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 IGFBPL1Q8WX77 278 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 HIST1H2BHQ93079 126 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 CIB3Q96Q77 187 aaPredicted RBP10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 HIST1H2BNQ99877 126 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 HIST1H2BMQ99879 126 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 AGMATQ9BSE5 352 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 TMEM147Q9BVK8 224 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 NAT8Q9UHE5 227 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 TRBV24-1A0A075B6N3 115 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 YPEL1O60688 119 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 CGB3P0DN86 165 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 CGB7P0DN87 165 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 PSMB3P49720 205 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 TMEM155Q4W5P6 130 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 OR8B3Q8NGG8 313 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 FAM216AQ8WUB2 273 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 YPEL2Q96QA6 119 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 OR8B2Q96RD0 313 aa10.79□□□□□ -0.68
SQSTM1-201ENST00000360718 OVOL3O00110 214 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 TMEM241Q24JQ0 296 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 C17orf58Q2M2W7 97 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 MORN2Q502X0 79 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 OR10P1Q8NGE3 313 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 ZNF714Q96N38 554 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 CCL19Q99731 98 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 OR2D2Q9H210 308 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 IDI2-AS1Q9NZ38 188 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 TRBV23-1A0A0A0MS06 115 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 CTXND1A0A1B0GTU2 59 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 TMEM250H0YL14 139 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 RAB29O14966 203 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 KRASP01116 189 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 CD81P60033 236 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 MEF2BQ02080 365 aaPredicted RBP10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 DNLZQ5SXM8 178 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 SSX7Q7RTT5 188 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 ZNF709Q8N972 641 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 NEIL1Q96FI4 390 aaPredicted RBP10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 SMIM7Q9BQ49 75 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 MALRD1Q5VYJ5 2156 aa10.78□□□□□ -0.68
SQSTM1-201ENST00000360718 J3QKU1 62 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 GPR6P46095 362 aaPredicted RBP10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 LOXL3P58215 753 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 UTF1Q5T230 341 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 WDR25Q64LD2 544 aaPredicted RBP10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 NCR3LG1Q68D85 454 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 OR10A7Q8NGE5 316 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 NRGNQ92686 78 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 ACTR3CQ9C0K3 210 aaPredicted RBP10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 LINC00574Q9H8X3 128 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 MANBALQ9NQG1 85 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 GFOD1Q9NXC2 390 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 PSG11Q9UQ72 335 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 C17orf112F2Z3M2 114 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms