RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 LRRC29Q8WV35 223 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 MAP1LC3BQ9GZQ8 125 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 PROCRQ9UNN8 238 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 IGKV1D-17A0A075B6S4 117 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 IGHV3-43A0A0B4J1X8 118 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 SRRM5B3KS81 715 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 IGHV3-43DP0DP04 118 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 NQO2P16083 231 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 GNB2P62879 340 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 WDR25Q64LD2 544 aaPredicted RBP6.01□□□□□ -1.45
CLCN3-202ENST00000360642 IGFL4Q6B9Z1 124 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 DTD1Q8TEA8 209 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 FAM216AQ8WUB2 273 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 DCTN5Q9BTE1 182 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 TMEM147Q9BVK8 224 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 SDF2L1Q9HCN8 221 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 CHD3Q12873 2000 aaKnown RBP6□□□□□ -1.45
CLCN3-202ENST00000360642 SPINT2O43291 252 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 RPS10P46783 165 aaKnown RBP6□□□□□ -1.45
CLCN3-202ENST00000360642 COMPP49747 757 aaPredicted RBP6□□□□□ -1.45
CLCN3-202ENST00000360642 RND2P52198 227 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 ELLP55199 621 aaPredicted RBP6□□□□□ -1.45
CLCN3-202ENST00000360642 FBLN7Q53RD9 439 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 H2BFWTQ7Z2G1 175 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 RFESDQ8TAC1 157 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 CIB3Q96Q77 187 aaPredicted RBP6□□□□□ -1.45
CLCN3-202ENST00000360642 SERTAD4Q9NUC0 356 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 PSG11Q9UQ72 335 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 DEFB108AA8MXU0 73 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 NDUFS6O75380 124 aaKnown RBP6□□□□□ -1.45
CLCN3-202ENST00000360642 GZMHP20718 246 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 DUTP33316 252 aaKnown RBP6□□□□□ -1.45
CLCN3-202ENST00000360642 CD81P60033 236 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 FOXI1Q12951 378 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 MORN2Q502X0 79 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 NCR3LG1Q68D85 454 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 LRP11Q86VZ4 500 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 Q8N7P7 452 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 OR2Z1Q8NG97 314 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 OR10P1Q8NGE3 313 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 CORO2AQ92828 525 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 PCGF1Q9BSM1 259 aa6□□□□□ -1.45
CLCN3-202ENST00000360642 TGIF2-C20orf24A0A0A6YYL0 155 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 YPEL1O60688 119 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 CYB5R3P00387 301 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-202ENST00000360642 LHBP01229 141 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 IGHV3-13P01766 116 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 HOXA5P20719 270 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 DEFB109BQ30KR1 87 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 Q3ZCU0 254 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 RBPMS2Q6ZRY4 209 aaKnown RBP5.99□□□□□ -1.45
CLCN3-202ENST00000360642 GCSAMQ8N6F7 178 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 RNASE8Q8TDE3 154 aaKnown RBP5.99□□□□□ -1.45
CLCN3-202ENST00000360642 LHX4Q969G2 390 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 GRAMD2BQ96HH9 432 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 YPEL2Q96QA6 119 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 TCEAL7Q9BRU2 100 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 NPCDR1Q9BY65 106 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 SLC39A9Q9NUM3 307 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 JPT1Q9UK76 154 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 CADP27708 2225 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 USF3Q68DE3 2245 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 CTXND1A0A1B0GTU2 59 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 CEBPZOSA8MTT3 80 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 CLN5O75503 358 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 IFNA1P01562 189 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 MBP02144 154 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 EGR2P11161 476 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-202ENST00000360642 PDLIM3Q53GG5 364 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-202ENST00000360642 SPRNQ5BIV9 151 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 IGFL3Q6UXB1 125 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 SLC16A13Q7RTY0 426 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 NHLRC2Q8NBF2 726 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 QTRT1Q9BXR0 403 aaKnown RBP5.99□□□□□ -1.45
CLCN3-202ENST00000360642 URGCP-MRPS24S4R325 110 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 RIF1Q5UIP0 2472 aaKnown RBP5.99□□□□□ -1.45
CLCN3-202ENST00000360642 C15orf62A8K5M9 175 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 OR9G9P0C7N8 305 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 FGF7P21781 194 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 MEF2BQ02080 365 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-202ENST00000360642 TFF3Q07654 80 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 TIMM23BQ5SRD1 257 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 OR10G9Q8NGN4 311 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 OR10G7Q8NGN6 311 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 OR13D1Q8NGV5 346 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 NANPQ8TBE9 248 aa5.99□□□□□ -1.45
CLCN3-202ENST00000360642 AKAP13Q12802 2813 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 IFITM10A6NMD0 228 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 CLDN34H7C241 214 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 HPRT1P00492 218 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 CGB3P0DN86 165 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 CGB7P0DN87 165 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 B2MP61769 119 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 UBE2V1Q13404 147 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 KIAA0141Q14154 515 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-202ENST00000360642 EDDM3AQ14507 147 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 WDR73Q6P4I2 378 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 ZNF251Q9BRH9 671 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 TMPRSS5Q9H3S3 457 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 NCOR1P1Q9H4R4 102 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms