RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 GLRX2Q9NS18 164 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 CD160O95971 181 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 EGR1P18146 543 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 ZNF658BQ4V348 819 aaPredicted RBP7.53□□□□□ -1.2
COL6A6-201ENST00000358511 SAXO1Q8IYX7 474 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 KCNK17Q96T54 332 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 NPIPB13A6NJU9 1138 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 NPIPB4C9JG80 1138 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 PNKDQ8N490 385 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 LHFPL6Q9Y693 200 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 IGLV1-36A0A0B4J1U3 117 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 UMODP07911 640 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 CISD3P0C7P0 127 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 CKS1BP61024 79 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 RPL8P62917 257 aaKnown RBP7.53□□□□□ -1.2
COL6A6-201ENST00000358511 TMEM196Q5HYL7 178 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 PRR7Q8TB68 274 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 ZNF714Q96N38 554 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 AMELYQ99218 206 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 RNF126Q9BV68 326 aa7.53□□□□□ -1.2
COL6A6-201ENST00000358511 TRBV24-1A0A075B6N3 115 aa7.52□□□□□ -1.2
COL6A6-201ENST00000358511 A0A1B0GW64 132 aa7.52□□□□□ -1.2
COL6A6-201ENST00000358511 MEF2CQ06413 473 aaPredicted RBP7.52□□□□□ -1.2
COL6A6-201ENST00000358511 SSC4DQ8WTU2 575 aa7.52□□□□□ -1.2
COL6A6-201ENST00000358511 RTBDNQ9BSG5 229 aaPredicted RBP7.52□□□□□ -1.2
COL6A6-201ENST00000358511 DTX4Q9Y2E6 619 aa7.52□□□□□ -1.2
COL6A6-201ENST00000358511 IGKV1-8A0A0C4DH67 115 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 FAM90A27PA6NNH2 459 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 K7EQS6 105 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 TBR1Q16650 682 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 GPR35Q9HC97 309 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 UNC119Q13432 240 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 C16orf47Q6ZP98 133 aaPredicted RBP7.52□□□□□ -1.21
COL6A6-201ENST00000358511 NR2C2APQ86WQ0 139 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 FAM60AQ9NP50 221 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 LOXL2Q9Y4K0 774 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 FTH1P19P0C7X4 201 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 TFPI2P48307 235 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 OR13C6PQ8NH95 151 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 ADMP35318 185 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 PYY3Q5JQD4 70 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 SPSB2Q99619 263 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 PF4V1P10720 104 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 DRD3P35462 400 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 ATP5IP56385 69 aaPredicted RBP7.52□□□□□ -1.21
COL6A6-201ENST00000358511 RPL23P62829 140 aaKnown RBP7.52□□□□□ -1.21
COL6A6-201ENST00000358511 DCAF10Q5QP82 559 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 OR51G1Q8NGK1 321 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 RABAC1Q9UI14 185 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 ADAMTS9Q9P2N4 1935 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 KLF4O43474 513 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 DEFB109BQ30KR1 87 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 SSBP4Q9BWG4 385 aaPredicted RBP7.52□□□□□ -1.21
COL6A6-201ENST00000358511 CHODLQ9H9P2 273 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 PHLDA3Q9Y5J5 127 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 IZUMO1RA6ND01 250 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 HIGD1CA8MV81 97 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 CXCL10P02778 98 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 UBE2V1Q13404 147 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 LINC01590Q5TEZ4 76 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 C1orf174Q8IYL3 243 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 AICDAQ9GZX7 198 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 TMEM160Q9NX00 188 aa7.52□□□□□ -1.21
COL6A6-201ENST00000358511 TRAV8-6A0A0B4J262 113 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 EIF4EBP2Q13542 120 aaPredicted RBP7.51□□□□□ -1.21
COL6A6-201ENST00000358511 OR4C13Q8NGP0 309 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 LPAR2Q9HBW0 351 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 A0A1B0GUT8 65 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 FAM157AC9JC47 383 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 CRYBA2P53672 197 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 DLX6P56179 175 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 TIMM23BQ5SRD1 257 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 TMEM78Q5T7P6 136 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 MBNL2Q5VZF2 373 aaKnown RBP7.51□□□□□ -1.21
COL6A6-201ENST00000358511 ZFAND6Q6FIF0 208 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 SLC25A28Q96A46 364 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 NRTNQ99748 197 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 ZG16O60844 167 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 ATP5LO75964 103 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 PRSS2P07478 247 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 ASPHD2Q6ICH7 369 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 LHX9Q9NQ69 397 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 BEX4Q9NWD9 120 aaPredicted RBP7.51□□□□□ -1.21
COL6A6-201ENST00000358511 TTC9CQ8N5M4 171 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 ZNF721Q8TF20 911 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 SSBP3Q9BWW4 388 aaPredicted RBP7.51□□□□□ -1.21
COL6A6-201ENST00000358511 TYMSP04818 313 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 APELAP0DMC3 54 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 SRSF12Q8WXF0 261 aaKnown RBP7.51□□□□□ -1.21
COL6A6-201ENST00000358511 ZNF488Q96MN9 340 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 PCOLCE2Q9UKZ9 415 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 ESDP10768 282 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 CCL17Q92583 94 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 UCN2Q96RP3 112 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 PCNX3Q9H6A9 2034 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 LDLRAD4O15165 306 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 LIFP15018 202 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 MPZP25189 248 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 PSG9Q00887 426 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 Q6AWC8 147 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms