RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 CHODLQ9H9P2 273 aa18.53■□□□□ 0.56
POLR2J2-202ENST00000358438 PSENENQ9NZ42 101 aa18.53■□□□□ 0.56
POLR2J2-202ENST00000358438 TRAPPC2LQ9UL33 140 aa18.53■□□□□ 0.56
POLR2J2-202ENST00000358438 IGSF10Q6WRI0 2623 aa18.52■□□□□ 0.56
POLR2J2-202ENST00000358438 PGLYRP1O75594 196 aaPredicted RBP18.52■□□□□ 0.56
POLR2J2-202ENST00000358438 TFF1P04155 84 aa18.52■□□□□ 0.56
POLR2J2-202ENST00000358438 TNFSF4P23510 183 aa18.52■□□□□ 0.56
POLR2J2-202ENST00000358438 F2RP25116 425 aa18.52■□□□□ 0.56
POLR2J2-202ENST00000358438 GRNP28799 593 aaKnown RBP18.52■□□□□ 0.56
POLR2J2-202ENST00000358438 COTL1Q14019 142 aa18.52■□□□□ 0.56
POLR2J2-202ENST00000358438 FAM90A1Q86YD7 464 aa18.52■□□□□ 0.56
POLR2J2-202ENST00000358438 TAF15Q92804 592 aaKnown RBP eCLIP18.52■□□□□ 0.56
POLR2J2-202ENST00000358438 NEIL1Q96FI4 390 aaPredicted RBP18.52■□□□□ 0.56
POLR2J2-202ENST00000358438 PLPPR2Q96GM1 343 aa18.52■□□□□ 0.56
POLR2J2-202ENST00000358438 AURKAIP1Q9NWT8 199 aaPredicted RBP18.52■□□□□ 0.56
POLR2J2-202ENST00000358438 SELENOTP62341 195 aa18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 CDSNQ15517 529 aa18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 TPTE2P1Q5T6R2 138 aa18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 MBNL3Q9NUK0 354 aaKnown RBP18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 WIPI2Q9Y4P8 454 aa18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 TRAV39A0A0B4J263 110 aa18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 SHISA9B4DS77 424 aa18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 H3BP45 60 aa18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 LHBP01229 141 aa18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 YPEL3P61236 119 aaPredicted RBP18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 TOMM20LQ6UXN7 152 aa18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 LINC01560Q8TB33 94 aa18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 SDSLQ96GA7 329 aa18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 GCM1Q9NP62 436 aa18.51■□□□□ 0.55
POLR2J2-202ENST00000358438 SIAH2O43255 324 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 NXPH3O95157 252 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 PSG2P11465 335 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 TMEM256Q8N2U0 113 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 RPP25LQ8N5L8 163 aaKnown RBP18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 CD177Q8N6Q3 437 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 GAL3ST2Q9H3Q3 398 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 CCL28Q9NRJ3 127 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 METRNQ9UJH8 293 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 CACNA1DQ01668 2161 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 TMEM30CPA0ZSE6 113 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 TMPRSS2O15393 492 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 PRDX2P32119 198 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 ARL16Q0P5N6 197 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 OR5I1Q13606 314 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 HAPLN4Q86UW8 402 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 OR4F5Q8NH21 305 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 OR4F4Q96R69 305 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 VAMP8Q9BV40 100 aa18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 ERRFI1Q9UJM3 462 aaPredicted RBP18.5■□□□□ 0.55
POLR2J2-202ENST00000358438 IGKV1D-17A0A075B6S4 117 aa18.49■□□□□ 0.55
POLR2J2-202ENST00000358438 IGKV1D-13A0A0B4J2D9 117 aa18.49■□□□□ 0.55
POLR2J2-202ENST00000358438 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.49■□□□□ 0.55
POLR2J2-202ENST00000358438 VSTM5A8MXK1 200 aa18.49■□□□□ 0.55
POLR2J2-202ENST00000358438 IGKV1-13P0DP09 117 aa18.49■□□□□ 0.55
POLR2J2-202ENST00000358438 SLC35E4Q6ICL7 350 aa18.49■□□□□ 0.55
POLR2J2-202ENST00000358438 IL1F10Q8WWZ1 152 aa18.49■□□□□ 0.55
POLR2J2-202ENST00000358438 BBC3Q96PG8 261 aaPredicted RBP18.49■□□□□ 0.55
POLR2J2-202ENST00000358438 DIDO1Q9BTC0 2240 aaKnown RBP18.49■□□□□ 0.55
POLR2J2-202ENST00000358438 ROS1P08922 2347 aa18.49■□□□□ 0.55
POLR2J2-202ENST00000358438 A0A0G2JRQ6 117 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 A0A0U1RQK1 487 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 ZNF320A2RRD8 509 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 ITGB1BP1O14713 200 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 SERPINE2P07093 398 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 ADH4P08319 380 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 AESQ08117 197 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 FAM78BQ5VT40 261 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 OR4C12Q96R67 309 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 ZFYVE26Q68DK2 2539 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 TRAV9-1A0A075B6T8 112 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 C17orf100A8MU93 164 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 MMP23AO75900 390 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 CD3EP07766 207 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 GNG10P50151 68 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 ATP6V1FQ16864 119 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 CLEC12BQ2HXU8 276 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 COQ2Q96H96 371 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 RNF7Q9UBF6 113 aa18.48■□□□□ 0.55
POLR2J2-202ENST00000358438 NPIPB11E5RHQ5 1161 aa18.47■□□□□ 0.55
POLR2J2-202ENST00000358438 RAB7AP51149 207 aa18.47■□□□□ 0.55
POLR2J2-202ENST00000358438 PRSS8Q16651 343 aa18.47■□□□□ 0.55
POLR2J2-202ENST00000358438 OR4B1Q8NGF8 309 aa18.47■□□□□ 0.55
POLR2J2-202ENST00000358438 IGHV3OR15-7A0A075B7D8 119 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 FAM90A26D6RGX4 464 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 E7EQL1 145 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 PRB1P04280 392 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 CCL8P80075 99 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 TLE1Q04724 770 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 Q6ZWC4 215 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 Q8TCH9 128 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 DNAJC4Q9NNZ3 241 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 PPP1R3CQ9UQK1 317 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 ANKHD1Q8IWZ3 2542 aaKnown RBP18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 GABRA2P47869 451 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 NEUROG1Q92886 237 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 OR1A1Q9P1Q5 309 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 OR2W1Q9Y3N9 320 aa18.46■□□□□ 0.55
POLR2J2-202ENST00000358438 NUPR1O60356 82 aa18.45■□□□□ 0.54
POLR2J2-202ENST00000358438 IGKV1D-33P01593 117 aa18.45■□□□□ 0.54
POLR2J2-202ENST00000358438 IGKV1-33P01594 117 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms