RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 TMEM155Q4W5P6 130 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 SRXN1Q9BYN0 137 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 MTCL1Q9Y4B5 1905 aaKnown RBP9.53□□□□□ -0.88
COL11A1-202ENST00000358392 ATP5J2P56134 94 aa9.52□□□□□ -0.88
COL11A1-202ENST00000358392 KLF14Q8TD94 323 aaPredicted RBP9.52□□□□□ -0.88
COL11A1-202ENST00000358392 ARHGEF17Q96PE2 2063 aaPredicted RBP9.52□□□□□ -0.88
COL11A1-202ENST00000358392 HEATR5BQ9P2D3 2071 aa9.52□□□□□ -0.88
COL11A1-202ENST00000358392 C2orf68Q2NKX9 166 aa9.52□□□□□ -0.88
COL11A1-202ENST00000358392 TEX29Q8N6K0 151 aa9.52□□□□□ -0.88
COL11A1-202ENST00000358392 MRPL32Q9BYC8 188 aaKnown RBP9.52□□□□□ -0.88
COL11A1-202ENST00000358392 A6NNC1 897 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 IFITM2Q01629 132 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 C1orf122Q6ZSJ8 110 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 DRAM1Q8N682 238 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 SLC25A38Q96DW6 304 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 SCN9AQ15858 1988 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 FSTP19883 344 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 ZP4Q12836 540 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 PAPPA-AS1Q5QFB9 102 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 ATP1A1-AS1Q5TC04 95 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 CLEC19AQ6UXS0 136 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 WDYHV1Q96HA8 205 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 ELOVL5Q9NYP7 299 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 GATA2P23769 480 aaPredicted RBP9.52□□□□□ -0.89
COL11A1-202ENST00000358392 GNG5P63218 68 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 PRR31Q5SQ13 230 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 NPCDR1Q9BY65 106 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 TRGV2A0A075B6R0 118 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 NGFRP08138 427 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 OR2K2Q8NGT1 345 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 LHFPL6Q9Y693 200 aa9.52□□□□□ -0.89
COL11A1-202ENST00000358392 RP1P56715 2156 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 CTSSP25774 331 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 ADMP35318 185 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 OR10J3Q5JRS4 329 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 NHLRC3Q5JS37 347 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 TXNDC17Q9BRA2 123 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 CLEC7AQ9BXN2 247 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 ZP1P60852 638 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 SCARF2Q96GP6 870 aaPredicted RBP9.51□□□□□ -0.89
COL11A1-202ENST00000358392 VKORC1Q9BQB6 163 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 RNASE7Q9H1E1 156 aaKnown RBP9.51□□□□□ -0.89
COL11A1-202ENST00000358392 NXT2Q9NPJ8 142 aaKnown RBP9.51□□□□□ -0.89
COL11A1-202ENST00000358392 SMIM8Q96KF7 97 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 FGF5P12034 268 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 HIST1H4AP62805 103 aaKnown RBP9.51□□□□□ -0.89
COL11A1-202ENST00000358392 LHFPL4Q7Z7J7 247 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 TRBV5-5A0A0J9YX44 114 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 LINC01560Q8TB33 94 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 FBXL15Q9H469 300 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 DXOO77932 396 aaKnown RBP9.51□□□□□ -0.89
COL11A1-202ENST00000358392 IGKV1D-33P01593 117 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 IGKV1-33P01594 117 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 GZMMP51124 257 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 C19orf48Q6RUI8 117 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 LURAP1LQ8IV03 231 aa9.51□□□□□ -0.89
COL11A1-202ENST00000358392 PSMG3Q9BT73 122 aaPredicted RBP9.51□□□□□ -0.89
COL11A1-202ENST00000358392 TDRD15B5MCY1 1934 aaKnown RBP9.51□□□□□ -0.89
COL11A1-202ENST00000358392 IGHV1-69-2A0A0G2JMI3 117 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.5□□□□□ -0.89
COL11A1-202ENST00000358392 ATP5LO75964 103 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 CD160O95971 181 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 PDLIM4P50479 330 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 MRPS18AQ9NVS2 196 aaKnown RBP9.5□□□□□ -0.89
COL11A1-202ENST00000358392 PPIFP30405 207 aaKnown RBP9.5□□□□□ -0.89
COL11A1-202ENST00000358392 LHX2P50458 406 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 ISXQ2M1V0 245 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 FAM201AQ5SY85 155 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 LILRA6Q6PI73 481 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 SLC25A47Q6Q0C1 308 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 RPP21Q9H633 154 aaKnown RBP9.5□□□□□ -0.89
COL11A1-202ENST00000358392 SLC25A15Q9Y619 301 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 CXorf51AA0A1B0GTR3 108 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 NBEAP1P0C6P0 100 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 TMEM42Q69YG0 159 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 ASPHD2Q6ICH7 369 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 KIF13BQ9NQT8 1826 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 TBX6O95947 436 aaPredicted RBP9.5□□□□□ -0.89
COL11A1-202ENST00000358392 MIR17HGQ75NE6 70 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 POC1AQ8NBT0 407 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 ZNF48Q96MX3 618 aaPredicted RBP9.5□□□□□ -0.89
COL11A1-202ENST00000358392 HIGD1CA8MV81 97 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 H7C1H1 209 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 RAMP1O60894 148 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 SRD5A1P18405 259 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 PRSS53Q2L4Q9 553 aa9.5□□□□□ -0.89
COL11A1-202ENST00000358392 MPTX1A8MV57 137 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 TDGF1P3P51864 188 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 CDCP2Q5VXM1 449 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 RTN4RL2Q86UN3 420 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 FER1L6-AS1Q8NA97 138 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 KNL1Q8NG31 2342 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 IGKV1D-42A0A075B6H8 117 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 ITGBL1O95965 494 aaPredicted RBP9.49□□□□□ -0.89
COL11A1-202ENST00000358392 IGHV3-11P01762 117 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 LIMS1P48059 325 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 KCNK17Q96T54 332 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 SDF2L1Q9HCN8 221 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 JPT1Q9UK76 154 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 CHD5Q8TDI0 1954 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms