RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 BAXQ07812 192 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 EXOSC2Q13868 293 aaKnown RBP14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 ST8SIA2Q92186 375 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 CIB3Q96Q77 187 aaPredicted RBP14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 TMEM14BQ9NUH8 114 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 FBXL17Q9UF56 701 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 SOX21Q9Y651 276 aaPredicted RBP14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 SMAD7O15105 426 aaKnown RBP14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 SPDEFO95238 335 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 IGKV1D-33P01593 117 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 IGKV1-33P01594 117 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 LGALS7P47929 136 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 PSENENQ9NZ42 101 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 PRNDQ9UKY0 176 aa14.55□□□□□ -0.08
SMARCD3-202ENST00000356800 A0A0U1RQK1 487 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 SLC25A17O43808 307 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 KBTBD11O94819 623 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 SNRNP70P08621 437 aaKnown RBP14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 IAPPP10997 89 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 MYOD1P15172 320 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 NHLH2Q02577 135 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 MRGPRG-AS1Q2M3A8 158 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 OR4A5Q8NH83 315 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 VSTM2AQ8TAG5 236 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 DTD1Q8TEA8 209 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 PHYHIPLQ96FC7 376 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 TPSG1Q9NRR2 321 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 UBQLN2Q9UHD9 624 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 PLXNB1O43157 2135 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 MYO9AB2RTY4 2548 aa14.54□□□□□ -0.08
SMARCD3-202ENST00000356800 JTBO76095 146 aa14.53□□□□□ -0.08
SMARCD3-202ENST00000356800 IFNA17P01571 189 aa14.53□□□□□ -0.08
SMARCD3-202ENST00000356800 CRYGBP07316 175 aa14.53□□□□□ -0.08
SMARCD3-202ENST00000356800 FGF2P09038 288 aa14.53□□□□□ -0.08
SMARCD3-202ENST00000356800 PSG5Q15238 335 aa14.53□□□□□ -0.08
SMARCD3-202ENST00000356800 FAM120AOSQ5T036 256 aa14.53□□□□□ -0.08
SMARCD3-202ENST00000356800 TMEM167AQ8TBQ9 72 aa14.53□□□□□ -0.08
SMARCD3-202ENST00000356800 EAF1Q96JC9 268 aaPredicted RBP14.53□□□□□ -0.08
SMARCD3-202ENST00000356800 ITGB1BP2Q9UKP3 347 aa14.53□□□□□ -0.08
SMARCD3-202ENST00000356800 ZNF257Q9Y2Q1 563 aa14.53□□□□□ -0.08
SMARCD3-202ENST00000356800 MOSP00540 346 aa14.52□□□□□ -0.08
SMARCD3-202ENST00000356800 TPT1P13693 172 aaKnown RBP14.52□□□□□ -0.08
SMARCD3-202ENST00000356800 EIF5AP63241 154 aaKnown RBP14.52□□□□□ -0.08
SMARCD3-202ENST00000356800 EBI3Q14213 229 aa14.52□□□□□ -0.08
SMARCD3-202ENST00000356800 HNF4GQ14541 408 aa14.52□□□□□ -0.08
SMARCD3-202ENST00000356800 SPINK9Q5DT21 86 aa14.52□□□□□ -0.08
SMARCD3-202ENST00000356800 STX12Q86Y82 276 aa14.52□□□□□ -0.08
SMARCD3-202ENST00000356800 BAP18Q8IXM2 172 aa14.52□□□□□ -0.08
SMARCD3-202ENST00000356800 BSCL2Q96G97 398 aaPredicted RBP14.52□□□□□ -0.08
SMARCD3-202ENST00000356800 RNF5Q99942 180 aa14.52□□□□□ -0.08
SMARCD3-202ENST00000356800 FKBP11Q9NYL4 201 aa14.52□□□□□ -0.08
SMARCD3-202ENST00000356800 H3BP45 60 aa14.52□□□□□ -0.09
SMARCD3-202ENST00000356800 FSHBP01225 129 aa14.52□□□□□ -0.09
SMARCD3-202ENST00000356800 SULT1A1P50225 295 aa14.52□□□□□ -0.09
SMARCD3-202ENST00000356800 F2RL1P55085 397 aa14.52□□□□□ -0.09
SMARCD3-202ENST00000356800 HSPE1P61604 102 aaKnown RBP14.52□□□□□ -0.09
SMARCD3-202ENST00000356800 VMA21Q3ZAQ7 101 aa14.52□□□□□ -0.09
SMARCD3-202ENST00000356800 CLEC9AQ6UXN8 241 aa14.52□□□□□ -0.09
SMARCD3-202ENST00000356800 Q8N6K4 173 aa14.52□□□□□ -0.09
SMARCD3-202ENST00000356800 ZDHHC16Q969W1 377 aa14.52□□□□□ -0.09
SMARCD3-202ENST00000356800 TSNAXQ99598 290 aaKnown RBP14.52□□□□□ -0.09
SMARCD3-202ENST00000356800 NOTCH2Q04721 2471 aa14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 CEBPZOSA8MTT3 80 aa14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 KRTAP1-1Q07627 177 aa14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 PJVKQ0ZLH3 352 aa14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 RPL7L1Q6DKI1 246 aaKnown RBP14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 TMEM14EPQ6UXP3 125 aa14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 STPG2Q8N412 459 aa14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 TEX45Q8NA69 505 aa14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 UBAC2Q8NBM4 344 aa14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 OR2T10Q8NGZ9 312 aa14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 SCARB1Q8WTV0 552 aa14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 ZNF430Q9H8G1 570 aaPredicted RBP14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 NUP50Q9UKX7 468 aa14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 TCF19Q9Y242 345 aa14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 OR51B2Q9Y5P1 312 aa14.51□□□□□ -0.09
SMARCD3-202ENST00000356800 ZFHX3Q15911 3703 aa14.5□□□□□ -0.09
SMARCD3-202ENST00000356800 CST7O76096 145 aa14.5□□□□□ -0.09
SMARCD3-202ENST00000356800 HES1Q14469 280 aa14.5□□□□□ -0.09
SMARCD3-202ENST00000356800 SPANXN5Q5MJ07 72 aa14.5□□□□□ -0.09
SMARCD3-202ENST00000356800 ALKAL2Q6UX46 152 aa14.5□□□□□ -0.09
SMARCD3-202ENST00000356800 OR5B3Q8NH48 314 aa14.5□□□□□ -0.09
SMARCD3-202ENST00000356800 SMIM3Q9BZL3 60 aa14.5□□□□□ -0.09
SMARCD3-202ENST00000356800 MEGF9Q9H1U4 602 aa14.5□□□□□ -0.09
SMARCD3-202ENST00000356800 WFDC1Q9HC57 220 aa14.5□□□□□ -0.09
SMARCD3-202ENST00000356800 SIGLEC9Q9Y336 463 aa14.5□□□□□ -0.09
SMARCD3-202ENST00000356800 BORCS7-ASMTA0A0B4J1R7 106 aa14.49□□□□□ -0.09
SMARCD3-202ENST00000356800 BRS3P32247 399 aa14.49□□□□□ -0.09
SMARCD3-202ENST00000356800 VDAC2P45880 294 aaPredicted RBP14.49□□□□□ -0.09
SMARCD3-202ENST00000356800 RPL8P62917 257 aaKnown RBP14.49□□□□□ -0.09
SMARCD3-202ENST00000356800 MMDQ15546 238 aa14.49□□□□□ -0.09
SMARCD3-202ENST00000356800 NPBQ8NG41 125 aa14.49□□□□□ -0.09
SMARCD3-202ENST00000356800 OR5C1Q8NGR4 320 aa14.49□□□□□ -0.09
SMARCD3-202ENST00000356800 FBXL15Q9H469 300 aa14.49□□□□□ -0.09
SMARCD3-202ENST00000356800 METTL1Q9UBP6 276 aaKnown RBP14.49□□□□□ -0.09
SMARCD3-202ENST00000356800 TEX50A0A1B0GTY4 177 aa14.49□□□□□ -0.09
SMARCD3-202ENST00000356800 RRHO14718 337 aa14.49□□□□□ -0.09
SMARCD3-202ENST00000356800 NDUFA3O95167 84 aa14.49□□□□□ -0.09
SMARCD3-202ENST00000356800 HTR2BP41595 481 aa14.49□□□□□ -0.09
SMARCD3-202ENST00000356800 ZNF266Q14584 549 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 388.6 ms