RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 NBEAP1P0C6P0 100 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 DDTP30046 118 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 TBR1Q16650 682 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 LINC01587Q99440 93 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 RPP21Q9H633 154 aaKnown RBP5.48□□□□□ -1.53
UPF2-201ENST00000356352 TMEM160Q9NX00 188 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 COL18A1P39060 1754 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 TTC3P53804 2025 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 LINC01549A6NIU2 74 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 MPTX1A8MV57 137 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 IGKV1D-33P01593 117 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 IGKV1-33P01594 117 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 SNRPCP09234 159 aaKnown RBP5.48□□□□□ -1.53
UPF2-201ENST00000356352 MDKP21741 143 aaPredicted RBP5.48□□□□□ -1.53
UPF2-201ENST00000356352 VDAC2P45880 294 aaPredicted RBP5.48□□□□□ -1.53
UPF2-201ENST00000356352 PPP1R32Q7Z5V6 425 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 C11orf68Q9H3H3 251 aaKnown RBP5.48□□□□□ -1.53
UPF2-201ENST00000356352 DMRT1Q9Y5R6 373 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 IGKV1D-42A0A075B6H8 117 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 CD8AP01732 235 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 TDGF1P13385 188 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 MALP21145 153 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 LEAP2Q969E1 77 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 WFIKKN1Q96NZ8 548 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 OTORQ9NRC9 128 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 A0A1B0GUT8 65 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 GCM2O75603 506 aaPredicted RBP5.48□□□□□ -1.53
UPF2-201ENST00000356352 F12P00748 615 aaPredicted RBP5.48□□□□□ -1.53
UPF2-201ENST00000356352 PEAR1Q5VY43 1037 aaPredicted RBP5.48□□□□□ -1.53
UPF2-201ENST00000356352 PVRIGQ6DKI7 326 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 BIVMQ86UB2 503 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 LINC01560Q8TB33 94 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 BEX4Q9NWD9 120 aaPredicted RBP5.48□□□□□ -1.53
UPF2-201ENST00000356352 FOCADQ5VW36 1801 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 DLEC1Q9Y238 1755 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 ZNF688P0C7X2 276 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 CEACAM1P13688 526 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 KIR3DL3Q8N743 410 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 SPSB2Q99619 263 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 SDHCQ99643 169 aaPredicted RBP5.48□□□□□ -1.53
UPF2-201ENST00000356352 ASCL2Q99929 193 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 FOXJ2Q9P0K8 574 aa5.48□□□□□ -1.53
UPF2-201ENST00000356352 TRBV7-9A0A0J9YWB2 115 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 C1QL1O75973 258 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 TYMSP04818 313 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 TGIF1Q15583 401 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 VKORC1L1Q8N0U8 176 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 PRSS22Q9GZN4 317 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 FOXA2Q9Y261 457 aaPredicted RBP5.47□□□□□ -1.53
UPF2-201ENST00000356352 SHANK3Q9BYB0 1731 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 TRGV2A0A075B6R0 118 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 DPRXA6NFQ7 191 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 IQCF6A8MYZ5 107 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.47□□□□□ -1.53
UPF2-201ENST00000356352 M0R381 172 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 ZNF708P17019 499 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 RPL39P5Q59GN2 51 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 STHQ8IWL8 128 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 FER1L6-AS1Q8NA97 138 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 OR52E5Q8NH55 327 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 WDYHV1Q96HA8 205 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 TRGV11A0A075B6L2 103 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 A0A1W2PR77 199 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 DSCR9P59020 149 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 CD300CQ08708 224 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 C1QTNF5Q9BXJ0 243 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 KIF13BQ9NQT8 1826 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 IGHV3OR16-10A0A075B7F0 116 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 IZUMO1RA6ND01 250 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 IGKV3-20P01619 116 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 APOHP02749 345 aaPredicted RBP5.47□□□□□ -1.53
UPF2-201ENST00000356352 NAT1P18440 290 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 PRSS53Q2L4Q9 553 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 OR10J3Q5JRS4 329 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 TMEM42Q69YG0 159 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 ORMDL3Q8N138 153 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 TMEM167AQ8TBQ9 72 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 RNASE6Q93091 150 aaKnown RBP5.47□□□□□ -1.53
UPF2-201ENST00000356352 GDF15Q99988 308 aa5.47□□□□□ -1.53
UPF2-201ENST00000356352 MYH14Q7Z406 1995 aaKnown RBP5.46□□□□□ -1.53
UPF2-201ENST00000356352 RGPD3A6NKT7 1758 aaPredicted RBP5.46□□□□□ -1.53
UPF2-201ENST00000356352 IGHV2OR16-5A0A0B4J2B6 119 aa5.46□□□□□ -1.53
UPF2-201ENST00000356352 C12orf77C9JDV5 145 aa5.46□□□□□ -1.53
UPF2-201ENST00000356352 CECR9P0C854 216 aa5.46□□□□□ -1.53
UPF2-201ENST00000356352 RNASE4P34096 147 aaKnown RBP5.46□□□□□ -1.53
UPF2-201ENST00000356352 BSPH1Q075Z2 132 aa5.46□□□□□ -1.53
UPF2-201ENST00000356352 LINC01590Q5TEZ4 76 aa5.46□□□□□ -1.53
UPF2-201ENST00000356352 C19orf48Q6RUI8 117 aa5.46□□□□□ -1.53
UPF2-201ENST00000356352 LINC00469Q8N7U9 141 aa5.46□□□□□ -1.53
UPF2-201ENST00000356352 FDCSPQ8NFU4 85 aa5.46□□□□□ -1.53
UPF2-201ENST00000356352 PHLDA1Q8WV24 401 aaPredicted RBP5.46□□□□□ -1.53
UPF2-201ENST00000356352 MARVELD3Q96A59 401 aa5.46□□□□□ -1.53
UPF2-201ENST00000356352 FBXL15Q9H469 300 aa5.46□□□□□ -1.53
UPF2-201ENST00000356352 NBR2O15453 112 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 CRPP02741 224 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 OTX1P32242 354 aaPredicted RBP5.46□□□□□ -1.54
UPF2-201ENST00000356352 GPR183P32249 361 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 IFI27P40305 119 aaPredicted RBP5.46□□□□□ -1.54
UPF2-201ENST00000356352 RSPO4Q2I0M5 234 aaPredicted RBP5.46□□□□□ -1.54
UPF2-201ENST00000356352 C7orf69Q9H7B7 122 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms