RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 CABIN1Q9Y6J0 2220 aa9.42□□□□□ -0.9
GTF3C1-201ENST00000356183 MYO16Q9Y6X6 1858 aa9.42□□□□□ -0.9
GTF3C1-201ENST00000356183 IGHV3-64A0A075B6Q5 118 aa9.42□□□□□ -0.9
GTF3C1-201ENST00000356183 LOC390937A0A1W2PQ73 354 aa9.42□□□□□ -0.9
GTF3C1-201ENST00000356183 MGST3O14880 152 aa9.42□□□□□ -0.9
GTF3C1-201ENST00000356183 PIN1P1O15428 100 aa9.42□□□□□ -0.9
GTF3C1-201ENST00000356183 ASIPP42127 132 aa9.42□□□□□ -0.9
GTF3C1-201ENST00000356183 EEF1AKMT3Q96AZ1 226 aa9.42□□□□□ -0.9
GTF3C1-201ENST00000356183 CITED1Q99966 193 aa9.42□□□□□ -0.9
GTF3C1-201ENST00000356183 TUBA4BQ9H853 241 aa9.42□□□□□ -0.9
GTF3C1-201ENST00000356183 ARFGEF1Q9Y6D6 1849 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 CCL4P13236 92 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 CD69Q07108 199 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 TIMM23BQ5SRD1 257 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 NPCDR1Q9BY65 106 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 RPP21Q9H633 154 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 YBX2Q9Y2T7 364 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 C16orf97H3BN30 126 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 PEBP1P30086 187 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 HSPE1P61604 102 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 ZNF146Q15072 292 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 TRIP6Q15654 476 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 TMEM249Q2WGJ8 235 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 PCSK4Q6UW60 755 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 TEX45Q8NA69 505 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 MARS2Q96GW9 593 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 NRN1Q9NPD7 142 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 IGHV5-10-1A0A0J9YXX1 117 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 IZUMO1RA6ND01 250 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 TSPOP30536 169 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 FAM106AQ4KMX7 169 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 PAPPA-AS1Q5QFB9 102 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 SPRED2Q7Z698 418 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 LOC101059948A0A1B0GTJ6 334 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 A0A1W2PPV9 198 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 PRTN3P24158 256 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 EVI2AP22794 236 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 NPPCP23582 126 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 RAB9AP51151 201 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 SNRPD3P62318 126 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 ZNF585BQ52M93 769 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 FMC1Q96HJ9 113 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 NDUFAF3Q9BU61 184 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 SLC25A2Q9BXI2 301 aa9.41□□□□□ -0.9
GTF3C1-201ENST00000356183 UNC13CQ8NB66 2214 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 SRSF3P84103 164 aaKnown RBP9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 SRSF6Q13247 344 aaKnown RBP9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 ZNF562Q6V9R5 426 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 ASCL4Q6XD76 172 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 SELENOKQ9Y6D0 94 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 TRBV5-7A0A0A0MS05 114 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 SLC25A20O43772 301 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 ZP4Q12836 540 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 SAMD5Q5TGI4 173 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 DUX3Q96PT4 197 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 SLC25A15Q9Y619 301 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 ZNF708P17019 499 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 IGFBP2P18065 325 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 MALP21145 153 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 TSPAN7P41732 249 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 RNASE7Q9H1E1 156 aaKnown RBP9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 TMEM74BQ9NUR3 256 aa9.4□□□□□ -0.9
GTF3C1-201ENST00000356183 FAM90A26D6RGX4 464 aa9.4□□□□□ -0.91
GTF3C1-201ENST00000356183 CFAP161Q6P656 301 aa9.4□□□□□ -0.91
GTF3C1-201ENST00000356183 CHODLQ9H9P2 273 aa9.4□□□□□ -0.91
GTF3C1-201ENST00000356183 CCL21O00585 134 aa9.4□□□□□ -0.91
GTF3C1-201ENST00000356183 VENTXO95231 258 aa9.4□□□□□ -0.91
GTF3C1-201ENST00000356183 SRP19P09132 144 aaKnown RBP9.4□□□□□ -0.91
GTF3C1-201ENST00000356183 BTCP35070 178 aa9.4□□□□□ -0.91
GTF3C1-201ENST00000356183 FAM71F2Q6NXP2 309 aa9.4□□□□□ -0.91
GTF3C1-201ENST00000356183 FAM89BQ8N5H3 189 aa9.4□□□□□ -0.91
GTF3C1-201ENST00000356183 WFDC6Q9BQY6 131 aa9.4□□□□□ -0.91
GTF3C1-201ENST00000356183 OR10J3Q5JRS4 329 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 JMJD8Q96S16 334 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 TCF19Q9Y242 345 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 UBR3Q6ZT12 1888 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 DRD3P35462 400 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 RPL39P5Q59GN2 51 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 ZNF48Q96MX3 618 aaPredicted RBP9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 LY75O60449 1722 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 NKX2-8O15522 239 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 CELA2AP08217 269 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 GAGE2EQ4V326 116 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 COQ2Q96H96 371 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 NAA38Q9BRA0 125 aaKnown RBP9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 GAGE2DQ9UEU5 116 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 CLDND2Q8NHS1 167 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 VKORC1Q9BQB6 163 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 COX11Q9Y6N1 276 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 ABCA3Q99758 1704 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 HIGD1CA8MV81 97 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 LHX8Q68G74 356 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 RCC1LQ96I51 464 aaKnown RBP9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 SCN2AQ99250 2005 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 GNG5P63218 68 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 C1orf100Q5SVJ3 147 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 C19orf24Q9BVV8 132 aa9.39□□□□□ -0.91
GTF3C1-201ENST00000356183 PRB4P10163 310 aaPredicted RBP9.38□□□□□ -0.91
GTF3C1-201ENST00000356183 ORAOV1Q8WV07 137 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms