RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 JPT1Q9UK76 154 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 PIEZO1Q92508 2521 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 IGKV1-6A0A0C4DH72 117 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 IZUMO1RA6ND01 250 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 VSTM5A8MXK1 200 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 F5H5K5 113 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 STAG3L2P0CL84 134 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 IGFBP2P18065 325 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 TPRX1Q8N7U7 411 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 CLCF1Q9UBD9 225 aa13.12□□□□□ -0.31
RTN3-205ENST00000356000 CLDN14O95500 239 aa13.11□□□□□ -0.31
RTN3-205ENST00000356000 URB1-AS1Q96HZ7 61 aa13.11□□□□□ -0.31
RTN3-205ENST00000356000 DUSP23Q9BVJ7 150 aa13.11□□□□□ -0.31
RTN3-205ENST00000356000 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.11□□□□□ -0.31
RTN3-205ENST00000356000 OR7C1O76099 320 aaPredicted RBP13.11□□□□□ -0.31
RTN3-205ENST00000356000 CXorf1O96002 111 aa13.11□□□□□ -0.31
RTN3-205ENST00000356000 LHFPL2Q6ZUX7 228 aa13.11□□□□□ -0.31
RTN3-205ENST00000356000 TSTD1Q8NFU3 115 aa13.11□□□□□ -0.31
RTN3-205ENST00000356000 BORCS8Q96FH0 119 aa13.11□□□□□ -0.31
RTN3-205ENST00000356000 RNASE7Q9H1E1 156 aaKnown RBP13.11□□□□□ -0.31
RTN3-205ENST00000356000 SS18L2Q9UHA2 77 aa13.11□□□□□ -0.31
RTN3-205ENST00000356000 ZNF257Q9Y2Q1 563 aa13.11□□□□□ -0.31
RTN3-205ENST00000356000 GON4LQ3T8J9 2241 aa13.11□□□□□ -0.31
RTN3-205ENST00000356000 H3BMH7 237 aa13.1□□□□□ -0.31
RTN3-205ENST00000356000 ISLRO14498 428 aa13.1□□□□□ -0.31
RTN3-205ENST00000356000 LINC00173Q6ZV60 143 aa13.1□□□□□ -0.31
RTN3-205ENST00000356000 BMFQ96LC9 184 aa13.1□□□□□ -0.31
RTN3-205ENST00000356000 FAM110AQ9BQ89 295 aa13.1□□□□□ -0.31
RTN3-205ENST00000356000 PSG8Q9UQ74 426 aa13.1□□□□□ -0.31
RTN3-205ENST00000356000 RRHO14718 337 aa13.1□□□□□ -0.31
RTN3-205ENST00000356000 FABP2P12104 132 aa13.1□□□□□ -0.31
RTN3-205ENST00000356000 RPL8P62917 257 aaKnown RBP13.1□□□□□ -0.31
RTN3-205ENST00000356000 FXYD3Q14802 87 aa13.1□□□□□ -0.31
RTN3-205ENST00000356000 FAM162BQ5T6X4 162 aa13.1□□□□□ -0.31
RTN3-205ENST00000356000 RD3Q7Z3Z2 195 aa13.1□□□□□ -0.31
RTN3-205ENST00000356000 KIR2DS1A0A191URI9 304 aa13.09□□□□□ -0.31
RTN3-205ENST00000356000 KIR2DS4P43632 304 aa13.09□□□□□ -0.31
RTN3-205ENST00000356000 CYB561P49447 251 aa13.09□□□□□ -0.31
RTN3-205ENST00000356000 KIR2DS1Q14954 304 aa13.09□□□□□ -0.31
RTN3-205ENST00000356000 RSPO1Q2MKA7 263 aaPredicted RBP13.09□□□□□ -0.31
RTN3-205ENST00000356000 ADAMTSL5Q6ZMM2 481 aa13.09□□□□□ -0.31
RTN3-205ENST00000356000 NEU4Q8WWR8 484 aaPredicted RBP13.09□□□□□ -0.31
RTN3-205ENST00000356000 C5orf30Q96GV9 206 aa13.09□□□□□ -0.31
RTN3-205ENST00000356000 OR2J3O76001 311 aa13.09□□□□□ -0.31
RTN3-205ENST00000356000 ZNF585BQ52M93 769 aa13.09□□□□□ -0.31
RTN3-205ENST00000356000 SPATA31B1PQ5VZV4 182 aa13.09□□□□□ -0.31
RTN3-205ENST00000356000 INO80CQ6PI98 192 aaPredicted RBP13.09□□□□□ -0.31
RTN3-205ENST00000356000 PCSK4Q6UW60 755 aa13.09□□□□□ -0.31
RTN3-205ENST00000356000 SPANXB1Q9NS25 103 aaPredicted RBP13.09□□□□□ -0.31
RTN3-205ENST00000356000 SH2D7A6NKC9 451 aaPredicted RBP13.09□□□□□ -0.31
RTN3-205ENST00000356000 GATA3P23771 443 aa13.09□□□□□ -0.31
RTN3-205ENST00000356000 ZNF77Q15935 545 aa13.09□□□□□ -0.31
RTN3-205ENST00000356000 RSPO4Q2I0M5 234 aaPredicted RBP13.09□□□□□ -0.31
RTN3-205ENST00000356000 ZNF418Q8TF45 676 aaPredicted RBP13.09□□□□□ -0.31
RTN3-205ENST00000356000 OR2W1Q9Y3N9 320 aa13.09□□□□□ -0.31
RTN3-205ENST00000356000 LEPROTL1O95214 131 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 CELA3AP09093 270 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 DRD3P35462 400 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 GNG4P50150 75 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 HERV-K104P63124 156 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 CENPWQ5EE01 88 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 FOXL2NBQ6ZUU3 175 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 DOLPP1Q86YN1 238 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 H1FXQ92522 213 aaKnown RBP13.08□□□□□ -0.32
RTN3-205ENST00000356000 ATP23Q9Y6H3 246 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 MGST1P10620 155 aaKnown RBP13.08□□□□□ -0.32
RTN3-205ENST00000356000 PLCXD2Q0VAA5 305 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 STPG3Q8N7X2 389 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 MS4A5Q9H3V2 200 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 MTCH1Q9NZJ7 389 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 WDR83OSQ9Y284 106 aa13.08□□□□□ -0.32
RTN3-205ENST00000356000 NCOA6Q14686 2063 aaPredicted RBP13.08□□□□□ -0.32
RTN3-205ENST00000356000 IGHV1-24A0A0C4DH33 117 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 VWC2LB2RUY7 222 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 WDR74Q6RFH5 385 aaPredicted RBP13.07□□□□□ -0.32
RTN3-205ENST00000356000 RAB37Q96AX2 223 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 C19orf24Q9BVV8 132 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 ALKBH4Q9NXW9 302 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 HILPDAQ9Y5L2 63 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 LRRC30A6NM36 301 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 SNAI2O43623 268 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 FGF6P10767 208 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 EDDM3BP56851 147 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 AESQ08117 197 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 CARD17Q5XLA6 110 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 FGF22Q9HCT0 170 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 TRAPPC2LQ9UL33 140 aa13.07□□□□□ -0.32
RTN3-205ENST00000356000 TNRC6AQ8NDV7 1962 aaKnown RBP13.06□□□□□ -0.32
RTN3-205ENST00000356000 TRBV7-9A0A0J9YWB2 115 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 A0A0J9YY10 115 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 C21orf140B9A014 251 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 AREGP15514 252 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 FAM69BQ5VUD6 431 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 PARM1Q6UWI2 310 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 PQLC2Q6ZP29 291 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 SPAG8Q99932 426 aaPredicted RBP13.06□□□□□ -0.32
RTN3-205ENST00000356000 RTTNQ86VV8 2226 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 MYO7AQ13402 2215 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 HELTA6NFD8 242 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms