RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 IGHV3OR16-10A0A075B7F0 116 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 CST7O76096 145 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 IGKV1D-33P01593 117 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 IGKV1-33P01594 117 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 FGF2P09038 288 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 CNTFRP26992 372 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 UBA52P62987 128 aaKnown RBP10.94□□□□□ -0.66
HOXA1-202ENST00000355633 PSG5Q15238 335 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 FAM122CQ6P4D5 195 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 STX12Q86Y82 276 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 TEX45Q8NA69 505 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 BSCL2Q96G97 398 aaPredicted RBP10.94□□□□□ -0.66
HOXA1-202ENST00000355633 AJUBAQ96IF1 538 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 CLCC1Q96S66 551 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 CYTL1Q9NRR1 136 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 ABCA12Q86UK0 2595 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 LY86O95711 162 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 MOSP00540 346 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 CFDP00746 253 aaPredicted RBP10.94□□□□□ -0.66
HOXA1-202ENST00000355633 TGFAP01135 160 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 IGHV4-31P0DP07 118 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 MYOD1P15172 320 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 HOXA1P49639 335 aaPredicted RBP10.94□□□□□ -0.66
HOXA1-202ENST00000355633 TMEM267Q0VDI3 215 aaPredicted RBP10.94□□□□□ -0.66
HOXA1-202ENST00000355633 TMEM249Q2WGJ8 235 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 RUSC1-AS1Q66K80 236 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 ZNF767PQ75MW2 155 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 LURAP1LQ8IV03 231 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 ZNF680Q8NEM1 530 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 OR5B3Q8NH48 314 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 ST8SIA2Q92186 375 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 HIPK2Q9H2X6 1198 aa10.94□□□□□ -0.66
HOXA1-202ENST00000355633 CENPEQ02224 2701 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 APCP25054 2843 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 NAV2Q8IVL1 2488 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 VPS13CQ709C8 3753 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 IFNA7P01567 189 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 SNRNP70P08621 437 aaKnown RBP10.93□□□□□ -0.66
HOXA1-202ENST00000355633 METTL15P1P0C7V9 234 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 CD24P25063 80 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 SULT1A1P50225 295 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 B2MP61769 119 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 HES1Q14469 280 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 TMEM217Q8N7C4 229 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 OR2T10Q8NGZ9 312 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 EAF1Q96JC9 268 aaPredicted RBP10.93□□□□□ -0.66
HOXA1-202ENST00000355633 HINT2Q9BX68 163 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 COMMD5Q9GZQ3 224 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 ZNF430Q9H8G1 570 aaPredicted RBP10.93□□□□□ -0.66
HOXA1-202ENST00000355633 TPSG1Q9NRR2 321 aa10.93□□□□□ -0.66
HOXA1-202ENST00000355633 STRAPQ9Y3F4 350 aaKnown RBP10.93□□□□□ -0.66
HOXA1-202ENST00000355633 TEX50A0A1B0GTY4 177 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 J3QLI3 93 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 OPN1MWP04001 364 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 CRYGBP07316 175 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 OPN1MW2P0DN77 364 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 OPN1MW3P0DN78 364 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 IGHV4-38-2P0DP08 117 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 VDAC2P45880 294 aaPredicted RBP10.92□□□□□ -0.66
HOXA1-202ENST00000355633 PRCDQ00LT1 54 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 EXOSC2Q13868 293 aaKnown RBP10.92□□□□□ -0.66
HOXA1-202ENST00000355633 HNF4GQ14541 408 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 MMDQ15546 238 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 STOML3Q8TAV4 291 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 ENY2Q9NPA8 101 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 HEYLQ9NQ87 328 aaPredicted RBP10.92□□□□□ -0.66
HOXA1-202ENST00000355633 METTL1Q9UBP6 276 aaKnown RBP10.92□□□□□ -0.66
HOXA1-202ENST00000355633 SIGLEC9Q9Y336 463 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 TPT1P13693 172 aaKnown RBP10.92□□□□□ -0.66
HOXA1-202ENST00000355633 BRS3P32247 399 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 DYNLT3P51808 116 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 RPL7L1Q6DKI1 246 aaKnown RBP10.92□□□□□ -0.66
HOXA1-202ENST00000355633 TMEM14EPQ6UXP3 125 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 BRD3OSQ6XYD6 125 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 MMD2Q8IY49 270 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 WFDC11Q8NEX6 87 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 OR5C1Q8NGR4 320 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 OR1L8Q8NGR8 309 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 OR4C12Q96R67 309 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 PLEKHA3Q9HB20 300 aa10.92□□□□□ -0.66
HOXA1-202ENST00000355633 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.91□□□□□ -0.66
HOXA1-202ENST00000355633 RRHO14718 337 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 NBR2O15453 112 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 JTBO76095 146 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 AVPP01185 164 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 EIF5AP63241 154 aaKnown RBP10.91□□□□□ -0.66
HOXA1-202ENST00000355633 RPP30P78346 268 aaKnown RBP10.91□□□□□ -0.66
HOXA1-202ENST00000355633 PJVKQ0ZLH3 352 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 EBI3Q14213 229 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 CLINT1Q14677 625 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 MRGPRG-AS1Q2M3A8 158 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 ALKAL2Q6UX46 152 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 PPP1R27Q86WC6 154 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 OR1S2Q8NGQ3 325 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 FOXC2Q99958 501 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 FBXL15Q9H469 300 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 WFDC1Q9HC57 220 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 KIAA1456Q9P272 454 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 UBQLN2Q9UHD9 624 aa10.91□□□□□ -0.66
HOXA1-202ENST00000355633 GCN1Q92616 2671 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms