RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 MALRD1Q5VYJ5 2156 aa11.45□□□□□ -0.58
EBF3-201ENST00000355311 AQP7O14520 342 aa11.44□□□□□ -0.58
EBF3-201ENST00000355311 REG1BP48304 166 aa11.44□□□□□ -0.58
EBF3-201ENST00000355311 CNN1P51911 297 aaKnown RBP11.44□□□□□ -0.58
EBF3-201ENST00000355311 MMDQ15546 238 aa11.44□□□□□ -0.58
EBF3-201ENST00000355311 PRAMEF5Q5TYX0 476 aa11.44□□□□□ -0.58
EBF3-201ENST00000355311 TMEM170AQ8WVE7 144 aa11.44□□□□□ -0.58
EBF3-201ENST00000355311 TMEM242Q9NWH2 141 aa11.44□□□□□ -0.58
EBF3-201ENST00000355311 CLCF1Q9UBD9 225 aa11.44□□□□□ -0.58
EBF3-201ENST00000355311 IGKV1D-17A0A075B6S4 117 aa11.44□□□□□ -0.58
EBF3-201ENST00000355311 IQCF6A8MYZ5 107 aa11.44□□□□□ -0.58
EBF3-201ENST00000355311 ZNF718Q3SXZ3 478 aa11.44□□□□□ -0.58
EBF3-201ENST00000355311 DPPA3Q6W0C5 159 aa11.44□□□□□ -0.58
EBF3-201ENST00000355311 ITLN1Q8WWA0 313 aa11.44□□□□□ -0.58
EBF3-201ENST00000355311 PARLQ9H300 379 aa11.44□□□□□ -0.58
EBF3-201ENST00000355311 MBNL3Q9NUK0 354 aaKnown RBP11.44□□□□□ -0.58
EBF3-201ENST00000355311 ZNF320A2RRD8 509 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 F2Z2F3 143 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 MMP23AO75900 390 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 CLDN14O95500 239 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 ATP5G3P48201 142 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 SEM1Q6ZVN7 128 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 STARD4Q96DR4 205 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 DKK4Q9UBT3 224 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 SPINK4O60575 86 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 ZNF883P0CG24 379 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 ANKRD39Q53RE8 183 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 OR2T10Q8NGZ9 312 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 ZNF71Q9NQZ8 489 aaPredicted RBP11.43□□□□□ -0.58
EBF3-201ENST00000355311 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.43□□□□□ -0.58
EBF3-201ENST00000355311 OOEPA6NGQ2 149 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 SLC25A6P12236 298 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 THBS3P49746 956 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 MIC13Q5XKP0 118 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 Q8TCH9 128 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 CCL13Q99616 98 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 FAM103A1Q9BTL3 118 aaKnown RBP11.43□□□□□ -0.58
EBF3-201ENST00000355311 NAT8Q9UHE5 227 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 RNF114Q9Y508 228 aa11.43□□□□□ -0.58
EBF3-201ENST00000355311 KIR2DL5BA0A0G2JN68 375 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.42□□□□□ -0.58
EBF3-201ENST00000355311 KIR2DL5BA0A0G2JPC4 375 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 FRMD6-AS1P0C7T7 363 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 RNF151Q2KHN1 245 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 Q6ZWC4 215 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 KIR2DL5AQ8N109 375 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 ZNF709Q8N972 641 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 CXXC4Q9H2H0 198 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 TUBG2Q9NRH3 451 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 OR6C3Q9NZP0 311 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 GYPAP02724 150 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 IL3RAP26951 378 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 CD82P27701 267 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 COA6Q5JTJ3 125 aaKnown RBP11.42□□□□□ -0.58
EBF3-201ENST00000355311 ACTL10Q5JWF8 245 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 LYG1Q8N1E2 194 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 ASCL3Q9NQ33 180 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 PROCRQ9UNN8 238 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 WIPI2Q9Y4P8 454 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 TRAPPC1Q9Y5R8 145 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 VPS13CQ709C8 3753 aa11.42□□□□□ -0.58
EBF3-201ENST00000355311 TNFSF13O75888 250 aa11.41□□□□□ -0.58
EBF3-201ENST00000355311 MEF2BQ02080 365 aaPredicted RBP11.41□□□□□ -0.58
EBF3-201ENST00000355311 TMEM41BQ5BJD5 291 aa11.41□□□□□ -0.58
EBF3-201ENST00000355311 ZNF474Q6S9Z5 364 aaPredicted RBP11.41□□□□□ -0.58
EBF3-201ENST00000355311 GCSAMQ8N6F7 178 aa11.41□□□□□ -0.58
EBF3-201ENST00000355311 FAM216BQ8N7L0 139 aa11.41□□□□□ -0.58
EBF3-201ENST00000355311 SNIP1Q8TAD8 396 aaKnown RBP11.41□□□□□ -0.58
EBF3-201ENST00000355311 MANBALQ9NQG1 85 aa11.41□□□□□ -0.58
EBF3-201ENST00000355311 HRASP01112 189 aa11.41□□□□□ -0.58
EBF3-201ENST00000355311 CEACAM8P31997 349 aaPredicted RBP11.41□□□□□ -0.58
EBF3-201ENST00000355311 SPATA31B1PQ5VZV4 182 aa11.41□□□□□ -0.58
EBF3-201ENST00000355311 INO80CQ6PI98 192 aaPredicted RBP11.41□□□□□ -0.58
EBF3-201ENST00000355311 LSM10Q969L4 123 aaKnown RBP11.41□□□□□ -0.58
EBF3-201ENST00000355311 AGMATQ9BSE5 352 aa11.41□□□□□ -0.58
EBF3-201ENST00000355311 SPINT2O43291 252 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 IGKV3-15P01624 115 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 NPPCP23582 126 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 CATR1Q13166 79 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 ACSF3Q4G176 576 aaPredicted RBP11.4□□□□□ -0.58
EBF3-201ENST00000355311 BHLHA15Q7RTS1 189 aaPredicted RBP11.4□□□□□ -0.58
EBF3-201ENST00000355311 Q8IYB0 196 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 OR1L6Q8NGR2 347 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 IGFBPL1Q8WX77 278 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 NPCDR1Q9BY65 106 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 NDUFB4O95168 129 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 C1QTNF9P0C862 333 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 OR10J1P30954 320 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 PDLIM4P50479 330 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 RAB7AP51149 207 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 SMIM21Q3B7S5 101 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 ZNF114Q8NC26 417 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 OR4A16Q8NH70 328 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 ACY3Q96HD9 319 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 HSPB9Q9BQS6 159 aa11.4□□□□□ -0.58
EBF3-201ENST00000355311 TRBV6-6A0A0A6YYG2 114 aa11.4□□□□□ -0.59
EBF3-201ENST00000355311 TM4SF5O14894 197 aa11.4□□□□□ -0.59
EBF3-201ENST00000355311 FOXH1O75593 365 aa11.4□□□□□ -0.59
EBF3-201ENST00000355311 MSMO1Q15800 293 aa11.4□□□□□ -0.59
EBF3-201ENST00000355311 CYP2G1PQ6ZSU1 146 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms