RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 HIST1H2BJP06899 126 aa17.84■□□□□ 0.45
LIMS2-202ENST00000355119 HIST1H2BOP23527 126 aa17.84■□□□□ 0.45
LIMS2-202ENST00000355119 HIST1H2BBP33778 126 aa17.84■□□□□ 0.45
LIMS2-202ENST00000355119 CDX1P47902 265 aaPredicted RBP17.84■□□□□ 0.45
LIMS2-202ENST00000355119 HIST1H2BDP58876 126 aa17.84■□□□□ 0.45
LIMS2-202ENST00000355119 HIST1H2BCP62807 126 aa17.84■□□□□ 0.45
LIMS2-202ENST00000355119 RAB31Q13636 194 aa17.84■□□□□ 0.45
LIMS2-202ENST00000355119 HIST2H2BEQ16778 126 aa17.84■□□□□ 0.45
LIMS2-202ENST00000355119 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.84■□□□□ 0.45
LIMS2-202ENST00000355119 HIST1H2BHQ93079 126 aa17.84■□□□□ 0.45
LIMS2-202ENST00000355119 HIST1H2BNQ99877 126 aa17.84■□□□□ 0.45
LIMS2-202ENST00000355119 HIST1H2BMQ99879 126 aa17.84■□□□□ 0.45
LIMS2-202ENST00000355119 TXNDC17Q9BRA2 123 aa17.84■□□□□ 0.45
LIMS2-202ENST00000355119 H7BYZ3 331 aa17.83■□□□□ 0.45
LIMS2-202ENST00000355119 CXorf1O96002 111 aa17.83■□□□□ 0.45
LIMS2-202ENST00000355119 S100PP25815 95 aa17.83■□□□□ 0.45
LIMS2-202ENST00000355119 ARSJQ5FYB0 599 aaPredicted RBP17.83■□□□□ 0.45
LIMS2-202ENST00000355119 TEPPQ6URK8 271 aa17.83■□□□□ 0.45
LIMS2-202ENST00000355119 ZNF833PQ6ZTB9 187 aa17.83■□□□□ 0.45
LIMS2-202ENST00000355119 ANAPC16Q96DE5 110 aa17.83■□□□□ 0.45
LIMS2-202ENST00000355119 SNRNP40Q96DI7 357 aaKnown RBP17.83■□□□□ 0.45
LIMS2-202ENST00000355119 OR5B12Q96R08 314 aa17.83■□□□□ 0.45
LIMS2-202ENST00000355119 CADP27708 2225 aa17.83■□□□□ 0.44
LIMS2-202ENST00000355119 LOC400499M0QZD8 3231 aa17.83■□□□□ 0.44
LIMS2-202ENST00000355119 PFN1P07737 140 aaKnown RBP17.82■□□□□ 0.44
LIMS2-202ENST00000355119 STAG3L2P0CL84 134 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 STAG3L3P0CL85 134 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 RPL31P62899 125 aaKnown RBP17.82■□□□□ 0.44
LIMS2-202ENST00000355119 PRCDQ00LT1 54 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 SAP30LQ9HAJ7 183 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 PLEKHA3Q9HB20 300 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 FKBP11Q9NYL4 201 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 SH3BGRL2Q9UJC5 107 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 TET2Q6N021 2002 aaPredicted RBP17.82■□□□□ 0.44
LIMS2-202ENST00000355119 PPIAL4EA0A075B759 164 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 PPIAL4DF5H284 164 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 PPIAL4FP0DN26 164 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 ATP5IP56385 69 aaPredicted RBP17.82■□□□□ 0.44
LIMS2-202ENST00000355119 C1orf159Q96HA4 380 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 PYGO2Q9BRQ0 406 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 HINT2Q9BX68 163 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 PPIAL4AQ9Y536 164 aa17.82■□□□□ 0.44
LIMS2-202ENST00000355119 TMEM178BH3BS89 294 aa17.81■□□□□ 0.44
LIMS2-202ENST00000355119 J3QR06 171 aa17.81■□□□□ 0.44
LIMS2-202ENST00000355119 B2MP61769 119 aa17.81■□□□□ 0.44
LIMS2-202ENST00000355119 TBR1Q16650 682 aa17.81■□□□□ 0.44
LIMS2-202ENST00000355119 CST9LP1Q5W188 147 aa17.81■□□□□ 0.44
LIMS2-202ENST00000355119 ZNF714Q96N38 554 aa17.81■□□□□ 0.44
LIMS2-202ENST00000355119 ARL14EPLP0DKL9 152 aa17.81■□□□□ 0.44
LIMS2-202ENST00000355119 NPPCP23582 126 aa17.81■□□□□ 0.44
LIMS2-202ENST00000355119 GALR1P47211 349 aa17.81■□□□□ 0.44
LIMS2-202ENST00000355119 RPL29P47914 159 aaKnown RBP17.81■□□□□ 0.44
LIMS2-202ENST00000355119 UBE2G2P60604 165 aa17.81■□□□□ 0.44
LIMS2-202ENST00000355119 NGBQ9NPG2 151 aa17.81■□□□□ 0.44
LIMS2-202ENST00000355119 BET1LQ9NYM9 111 aa17.81■□□□□ 0.44
LIMS2-202ENST00000355119 PRRC2CQ9Y520 2896 aaKnown RBP17.8■□□□□ 0.44
LIMS2-202ENST00000355119 ELOA3CA0A087WX78 387 aaPredicted RBP17.8■□□□□ 0.44
LIMS2-202ENST00000355119 APOA2P02652 100 aa17.8■□□□□ 0.44
LIMS2-202ENST00000355119 ATP5G3P48201 142 aa17.8■□□□□ 0.44
LIMS2-202ENST00000355119 GNB1P62873 340 aa17.8■□□□□ 0.44
LIMS2-202ENST00000355119 SPNS3Q6ZMD2 512 aa17.8■□□□□ 0.44
LIMS2-202ENST00000355119 SRD5A3Q9H8P0 318 aa17.8■□□□□ 0.44
LIMS2-202ENST00000355119 TRGC1P0CF51 173 aa17.79■□□□□ 0.44
LIMS2-202ENST00000355119 MYOD1P15172 320 aa17.79■□□□□ 0.44
LIMS2-202ENST00000355119 RHOBP62745 196 aa17.79■□□□□ 0.44
LIMS2-202ENST00000355119 SPACA3Q8IXA5 215 aa17.79■□□□□ 0.44
LIMS2-202ENST00000355119 ZCCHC24Q8N2G6 241 aaKnown RBP17.79■□□□□ 0.44
LIMS2-202ENST00000355119 OSR1Q8TAX0 266 aaPredicted RBP17.79■□□□□ 0.44
LIMS2-202ENST00000355119 ABHD5Q8WTS1 349 aa17.79■□□□□ 0.44
LIMS2-202ENST00000355119 SSMEM1Q8WWF3 244 aa17.79■□□□□ 0.44
LIMS2-202ENST00000355119 FRZBQ92765 325 aa17.79■□□□□ 0.44
LIMS2-202ENST00000355119 NEUROG1Q92886 237 aa17.79■□□□□ 0.44
LIMS2-202ENST00000355119 IGKV1-16P04430 117 aa17.79■□□□□ 0.44
LIMS2-202ENST00000355119 TMEM200BQ69YZ2 307 aa17.79■□□□□ 0.44
LIMS2-202ENST00000355119 STPG3Q8N7X2 389 aa17.79■□□□□ 0.44
LIMS2-202ENST00000355119 OR51G1Q8NGK1 321 aa17.79■□□□□ 0.44
LIMS2-202ENST00000355119 TEX50A0A1B0GTY4 177 aa17.78■□□□□ 0.44
LIMS2-202ENST00000355119 NDUFB3O43676 98 aa17.78■□□□□ 0.44
LIMS2-202ENST00000355119 S100A2P29034 98 aa17.78■□□□□ 0.44
LIMS2-202ENST00000355119 RBPJQ06330 500 aa17.78■□□□□ 0.44
LIMS2-202ENST00000355119 OR5B3Q8NH48 314 aa17.78■□□□□ 0.44
LIMS2-202ENST00000355119 MRPL20Q9BYC9 149 aaKnown RBP17.78■□□□□ 0.44
LIMS2-202ENST00000355119 NIT2Q9NQR4 276 aa17.78■□□□□ 0.44
LIMS2-202ENST00000355119 TMEM106BQ9NUM4 274 aa17.78■□□□□ 0.44
LIMS2-202ENST00000355119 ZNRD1Q9P1U0 126 aa17.78■□□□□ 0.44
LIMS2-202ENST00000355119 SRRM4A7MD48 611 aaKnown RBP17.77■□□□□ 0.44
LIMS2-202ENST00000355119 PHOX2AO14813 284 aa17.77■□□□□ 0.44
LIMS2-202ENST00000355119 TNFRSF13BO14836 293 aaPredicted RBP17.77■□□□□ 0.44
LIMS2-202ENST00000355119 SRP14P37108 136 aaKnown RBP17.77■□□□□ 0.44
LIMS2-202ENST00000355119 NECAP1Q8NC96 275 aa17.77■□□□□ 0.44
LIMS2-202ENST00000355119 PPP1R2P9O14990 202 aa17.77■□□□□ 0.43
LIMS2-202ENST00000355119 CCL3L1P16619 93 aa17.77■□□□□ 0.43
LIMS2-202ENST00000355119 C2orf83Q53S99 150 aa17.77■□□□□ 0.43
LIMS2-202ENST00000355119 LRRC10Q5BKY1 277 aa17.77■□□□□ 0.43
LIMS2-202ENST00000355119 ASCL5Q7RTU5 278 aa17.77■□□□□ 0.43
LIMS2-202ENST00000355119 GAR1Q9NY12 217 aaKnown RBP17.77■□□□□ 0.43
LIMS2-202ENST00000355119 IFITM10A6NMD0 228 aa17.76■□□□□ 0.43
LIMS2-202ENST00000355119 MT-CO2P00403 227 aa17.76■□□□□ 0.43
LIMS2-202ENST00000355119 SAA1P0DJI8 122 aaPredicted RBP17.76■□□□□ 0.43
LIMS2-202ENST00000355119 CD99P14209 185 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms