RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 STXBP6Q8NFX7 210 aa11.45□□□□□ -0.58
SMC6-201ENST00000351948 TRBV6-7A0A0A0MS04 114 aa11.45□□□□□ -0.58
SMC6-201ENST00000351948 PMCHP20382 165 aa11.45□□□□□ -0.58
SMC6-201ENST00000351948 KHDC3LQ587J8 217 aa11.45□□□□□ -0.58
SMC6-201ENST00000351948 SLC16A13Q7RTY0 426 aa11.45□□□□□ -0.58
SMC6-201ENST00000351948 ZNF430Q9H8G1 570 aaPredicted RBP11.45□□□□□ -0.58
SMC6-201ENST00000351948 SRRM5B3KS81 715 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 FCN1O00602 326 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 MEF2CQ06413 473 aaPredicted RBP11.44□□□□□ -0.58
SMC6-201ENST00000351948 MRPL54Q6P161 138 aaKnown RBP11.44□□□□□ -0.58
SMC6-201ENST00000351948 TCEAL7Q9BRU2 100 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 A0A1W2PNU3 283 aaPredicted RBP11.44□□□□□ -0.58
SMC6-201ENST00000351948 CSN3P07498 182 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 LTBP2Q14767 1821 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 MLNRO43193 412 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 MFAP4P55083 255 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 MORN2Q502X0 79 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 FAM89BQ8N5H3 189 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 CYB561D1Q8N8Q1 229 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 TOLLIPQ9H0E2 274 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 LINC00527Q9UJ94 153 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 ATRXP46100 2492 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 TRAV40A0A0B4J280 105 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 DLK1P80370 383 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 TXN2Q99757 166 aa11.44□□□□□ -0.58
SMC6-201ENST00000351948 IGSF23A1L1A6 192 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 IGHV3-11P01762 117 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 ADIPOQQ15848 244 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 MBNL2Q5VZF2 373 aaKnown RBP11.43□□□□□ -0.58
SMC6-201ENST00000351948 CD177Q8N6Q3 437 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 DUX5Q96PT3 197 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 MYO18BQ8IUG5 2567 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 UCP1P25874 307 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 BTCP35070 178 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 DHRS11Q6UWP2 260 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 C11orf44Q8N8P7 122 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 NAT8Q9UHE5 227 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 TUBD1Q9UJT1 453 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 ZNF503-AS2A6NEH8 195 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 TSTD3H0UI37 97 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 HSBP1O75506 76 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 TRGV3P03979 118 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 PAFAH1B2P68402 229 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 KLRD1Q13241 179 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 OR10G8Q8NGN5 311 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 HS3ST6Q96QI5 342 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 ACAA1P09110 424 aaPredicted RBP11.43□□□□□ -0.58
SMC6-201ENST00000351948 SERF2P84101 59 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 SIGLECL1Q8N7X8 197 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 NHLRC2Q8NBF2 726 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 RAB24Q969Q5 203 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 C16orf92Q96LL3 132 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 TMEM133Q9H2Q1 129 aa11.43□□□□□ -0.58
SMC6-201ENST00000351948 H3BQ15 152 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 CORTO00230 105 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 NDUFB4O95168 129 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 HSD17B13Q7Z5P4 300 aaPredicted RBP11.42□□□□□ -0.58
SMC6-201ENST00000351948 IL22RA2Q969J5 263 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 ADAMTS9Q9P2N4 1935 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 IGHV3OR16-12A0A075B7B8 117 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 A0A1W2PRX2 142 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 P01737 135 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 IL4P05112 153 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 GATA2P23769 480 aaPredicted RBP11.42□□□□□ -0.58
SMC6-201ENST00000351948 AQP10Q96PS8 301 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 METTL26Q96S19 204 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 ANKHD1Q8IWZ3 2542 aaKnown RBP11.42□□□□□ -0.58
SMC6-201ENST00000351948 NMBP08949 121 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 SAA1P0DJI8 122 aaPredicted RBP11.42□□□□□ -0.58
SMC6-201ENST00000351948 MMP9P14780 707 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 KRTDAPP60985 99 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 ATP5G2Q06055 141 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 C5orf17Q8NAS9 161 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 MAPK1IP1LQ8NDC0 245 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 OSR1Q8TAX0 266 aaPredicted RBP11.42□□□□□ -0.58
SMC6-201ENST00000351948 FAM210BQ96KR6 192 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 LOC102723971A0A1B0GUV8 181 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 PGPA6NDG6 321 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 FAM90A26D6RGX4 464 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 COL8A2P25067 703 aa11.42□□□□□ -0.58
SMC6-201ENST00000351948 RBPMS2Q6ZRY4 209 aaKnown RBP11.42□□□□□ -0.58
SMC6-201ENST00000351948 MDKP21741 143 aaPredicted RBP11.41□□□□□ -0.58
SMC6-201ENST00000351948 ZNF146Q15072 292 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 RPEL1Q2QD12 228 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 RNASEKQ6P5S7 137 aaKnown RBP11.41□□□□□ -0.58
SMC6-201ENST00000351948 CEP295Q9C0D2 2601 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 PLCE1Q9P212 2302 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 E7EQL1 145 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 TNFSF13O75888 250 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 SULT1A2P50226 295 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 ZNF273Q14593 569 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 CLRN3Q8NCR9 226 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 OR4B1Q8NGF8 309 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 MALRD1Q5VYJ5 2156 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 C7orf77A4D0Y5 90 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 RRHO14718 337 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 BCL2P10415 239 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 LINC00205P59089 165 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 HIST1H3AP68431 136 aa11.41□□□□□ -0.58
SMC6-201ENST00000351948 TMEM30BQ3MIR4 351 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms