RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 OR4X1Q8NH49 305 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 SSMEM1Q8WWF3 244 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 IL22RA2Q969J5 263 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 LSM10Q969L4 123 aaKnown RBP11.47□□□□□ -0.57
TRIM4-201ENST00000349062 SLC39A9Q9NUM3 307 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 SLC25A10Q9UBX3 287 aaPredicted RBP11.47□□□□□ -0.57
TRIM4-201ENST00000349062 ELOA3CA0A087WX78 387 aaPredicted RBP11.47□□□□□ -0.57
TRIM4-201ENST00000349062 DUXBA0A1W2PPF3 345 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 A0A1W2PRD5 423 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 A0A1W2PRF3 423 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 A0A1W2PRM7 423 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 ZNF705FA8MVS1 300 aaPredicted RBP11.47□□□□□ -0.57
TRIM4-201ENST00000349062 ENSAO43768 121 aaKnown RBP11.47□□□□□ -0.57
TRIM4-201ENST00000349062 HSPB1P04792 205 aaKnown RBP11.47□□□□□ -0.57
TRIM4-201ENST00000349062 ZNF705DP0CH99 300 aaPredicted RBP11.47□□□□□ -0.57
TRIM4-201ENST00000349062 ZNF705BP0CI00 300 aaPredicted RBP11.47□□□□□ -0.57
TRIM4-201ENST00000349062 CST9LP1Q5W188 147 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 GATAD1Q8WUU5 269 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 LHX4Q969G2 390 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 OR5B12Q96R08 314 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 C11orf1Q9H5F2 150 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 CBLN4Q9NTU7 201 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 OR6C3Q9NZP0 311 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 FUT9Q9Y231 359 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 PPP5D1E7EU14 171 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 K7ENP7 123 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 ADH4P08319 380 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 NUBP1P53384 320 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 OR10A7Q8NGE5 316 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 YPEL4Q96NS1 127 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 PCGF1Q9BSM1 259 aa11.47□□□□□ -0.57
TRIM4-201ENST00000349062 CD33P20138 364 aa11.46□□□□□ -0.57
TRIM4-201ENST00000349062 FFAR4Q5NUL3 377 aa11.46□□□□□ -0.57
TRIM4-201ENST00000349062 MRGPRGQ86SM5 289 aa11.46□□□□□ -0.57
TRIM4-201ENST00000349062 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.46□□□□□ -0.58
TRIM4-201ENST00000349062 C17orf100A8MU93 164 aa11.46□□□□□ -0.58
TRIM4-201ENST00000349062 ZNF506Q5JVG8 444 aa11.46□□□□□ -0.58
TRIM4-201ENST00000349062 HSD17B10Q99714 261 aaKnown RBP11.46□□□□□ -0.58
TRIM4-201ENST00000349062 ELOVL1Q9BW60 279 aa11.46□□□□□ -0.58
TRIM4-201ENST00000349062 SIRT7Q9NRC8 400 aa11.46□□□□□ -0.58
TRIM4-201ENST00000349062 TMEM140Q9NV12 185 aa11.46□□□□□ -0.58
TRIM4-201ENST00000349062 NPIPB11E5RHQ5 1161 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 AMBPP02760 352 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 TNFRSF1AP19438 455 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 RPL29P47914 159 aaKnown RBP11.45□□□□□ -0.58
TRIM4-201ENST00000349062 NHLH1Q02575 133 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 PRSS8Q16651 343 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 ZNF705AQ6ZN79 300 aaPredicted RBP11.45□□□□□ -0.58
TRIM4-201ENST00000349062 C16orf82Q7Z2V1 217 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 SLC35E3Q7Z769 313 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 PRR7Q8TB68 274 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 GAFA1Q96PS6 74 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 IL19Q9UHD0 177 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 PITPNC1Q9UKF7 332 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 TRAV38-1A0A0B4J264 116 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 H7BYZ3 331 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 EREGO14944 169 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 GZMBP10144 247 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 DIAPH2-AS1Q14236 149 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 TAF15Q92804 592 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRIM4-201ENST00000349062 IFI27L2Q9H2X8 130 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 MAP1LC3B2A6NCE7 125 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 RRHO14718 337 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 IGKV1-16P04430 117 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 CHRNA7P36544 502 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 CDSNQ15517 529 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 C17orf58Q2M2W7 97 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 Q8TCH9 128 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 RCC1LQ96I51 464 aaKnown RBP11.45□□□□□ -0.58
TRIM4-201ENST00000349062 MAP1LC3BQ9GZQ8 125 aa11.45□□□□□ -0.58
TRIM4-201ENST00000349062 IGLV3-9A0A075B6K5 115 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 HNF1AP20823 631 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 FAM3BP58499 235 aaPredicted RBP11.44□□□□□ -0.58
TRIM4-201ENST00000349062 CISD1Q9NZ45 108 aaKnown RBP11.44□□□□□ -0.58
TRIM4-201ENST00000349062 PPIAL4EA0A075B759 164 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 A0A087WWC5 75 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 KBTBD11-OT1A0A1B0GTJ5 212 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 LOC102723971A0A1B0GUV8 181 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 PPIAL4DF5H284 164 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 PPIAL4FP0DN26 164 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 BCL2P10415 239 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 ZNF25P17030 456 aaPredicted RBP11.44□□□□□ -0.58
TRIM4-201ENST00000349062 LOXL3P58215 753 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 OR10X1Q8NGY0 326 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 PPIAL4AQ9Y536 164 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 NKX6-3A6NJ46 265 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 E7EQL1 145 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 ACTL6BO94805 426 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 FAM90A2PQ658T7 463 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 OR4F5Q8NH21 305 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 OR4F4Q96R69 305 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 WDR61Q9GZS3 305 aaKnown RBP11.44□□□□□ -0.58
TRIM4-201ENST00000349062 ENY2Q9NPA8 101 aa11.44□□□□□ -0.58
TRIM4-201ENST00000349062 A0A1B0GUS0 222 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 IGKV1D-33P01593 117 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 IGKV1-33P01594 117 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 COX7A1P24310 79 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 GALR1P47211 349 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 ACSM6Q6P461 480 aa11.43□□□□□ -0.58
TRIM4-201ENST00000349062 OR1P1Q8NH06 330 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms