RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 OR4A16Q8NH70 328 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 HSPB9Q9BQS6 159 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 ZNF436Q9C0F3 470 aaPredicted RBP15.07■□□□□ 0
CHMP4A-201ENST00000347519 POMT1Q9Y6A1 747 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 TEX50A0A1B0GTY4 177 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 A0A1B0GW64 132 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 CGB1A6NKQ9 187 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 FGF16O43320 207 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 RPL8P62917 257 aaKnown RBP15.06■□□□□ 0
CHMP4A-201ENST00000347519 BLCAPP62952 87 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 CD83Q01151 205 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 SRSF4Q08170 494 aaKnown RBP15.06■□□□□ 0
CHMP4A-201ENST00000347519 SPINK9Q5DT21 86 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 THOC7Q6I9Y2 204 aaKnown RBP15.06■□□□□ 0
CHMP4A-201ENST00000347519 MMD2Q8IY49 270 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 OR1S1Q8NH92 325 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 SPIN2AQ99865 258 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 RASL11BQ9BPW5 248 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 SPIN2BQ9BPZ2 258 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.06■□□□□ 0
CHMP4A-201ENST00000347519 TMEM14BQ9NUH8 114 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 COA4Q9NYJ1 87 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 FOXA2Q9Y261 457 aaPredicted RBP15.06■□□□□ 0
CHMP4A-201ENST00000347519 OR51B2Q9Y5P1 312 aa15.06■□□□□ 0
CHMP4A-201ENST00000347519 LINC01548A6NM66 108 aa15.05■□□□□ -0
CHMP4A-201ENST00000347519 GPR137BO60478 399 aa15.05■□□□□ -0
CHMP4A-201ENST00000347519 TRAPPC2P0DI81 140 aa15.05■□□□□ -0
CHMP4A-201ENST00000347519 TRAPPC2BP0DI82 140 aa15.05■□□□□ -0
CHMP4A-201ENST00000347519 GNB1P62873 340 aa15.05■□□□□ -0
CHMP4A-201ENST00000347519 NDPQ00604 133 aa15.05■□□□□ -0
CHMP4A-201ENST00000347519 CD300CQ08708 224 aa15.05■□□□□ -0
CHMP4A-201ENST00000347519 TNXAQ16473 311 aa15.05■□□□□ -0
CHMP4A-201ENST00000347519 AARDQ4LEZ3 155 aa15.05■□□□□ -0
CHMP4A-201ENST00000347519 C16orf82Q7Z2V1 217 aa15.05■□□□□ -0
CHMP4A-201ENST00000347519 PDCD10Q9BUL8 212 aa15.05■□□□□ -0
CHMP4A-201ENST00000347519 PRNDQ9UKY0 176 aa15.05■□□□□ -0
CHMP4A-201ENST00000347519 IGHV7-81A0A0B4J1V7 117 aa15.04■□□□□ -0
CHMP4A-201ENST00000347519 RBMXL2O75526 392 aaKnown RBP15.04■□□□□ -0
CHMP4A-201ENST00000347519 HLA-DRB1P01911 266 aa15.04■□□□□ -0
CHMP4A-201ENST00000347519 HILS1P60008 231 aa15.04■□□□□ -0
CHMP4A-201ENST00000347519 CX3CL1P78423 397 aa15.04■□□□□ -0
CHMP4A-201ENST00000347519 Q5BKY6 102 aa15.04■□□□□ -0
CHMP4A-201ENST00000347519 ZNF418Q8TF45 676 aaPredicted RBP15.04■□□□□ -0
CHMP4A-201ENST00000347519 TAF15Q92804 592 aaKnown RBP eCLIP15.04■□□□□ -0
CHMP4A-201ENST00000347519 ST6GAL2Q96JF0 529 aa15.04■□□□□ -0
CHMP4A-201ENST00000347519 MAGT1Q9H0U3 335 aa15.04■□□□□ -0
CHMP4A-201ENST00000347519 RANGRFQ9HD47 186 aaPredicted RBP15.04■□□□□ -0
CHMP4A-201ENST00000347519 SCGB1D2O95969 90 aa15.03■□□□□ -0
CHMP4A-201ENST00000347519 MBPP02686 304 aaPredicted RBP15.03■□□□□ -0
CHMP4A-201ENST00000347519 ID3Q02535 119 aa15.03■□□□□ -0
CHMP4A-201ENST00000347519 ZNF429Q86V71 674 aa15.03■□□□□ -0
CHMP4A-201ENST00000347519 FYTTD1Q96QD9 318 aaKnown RBP15.03■□□□□ -0
CHMP4A-201ENST00000347519 NMES1Q9C002 83 aa15.03■□□□□ -0
CHMP4A-201ENST00000347519 FBXO7Q9Y3I1 522 aa15.03■□□□□ -0
CHMP4A-201ENST00000347519 SMLR1H3BR10 107 aa15.02■□□□□ -0
CHMP4A-201ENST00000347519 GIPP09681 153 aaPredicted RBP15.02■□□□□ -0
CHMP4A-201ENST00000347519 EGR2P11161 476 aaPredicted RBP15.02■□□□□ -0
CHMP4A-201ENST00000347519 COMPP49747 757 aaPredicted RBP15.02■□□□□ -0
CHMP4A-201ENST00000347519 HSPE1P61604 102 aaKnown RBP15.02■□□□□ -0
CHMP4A-201ENST00000347519 POLR2GP62487 172 aaKnown RBP eCLIP15.02■□□□□ -0
CHMP4A-201ENST00000347519 SRSF2Q01130 221 aaKnown RBP15.02■□□□□ -0
CHMP4A-201ENST00000347519 RAB32Q13637 225 aa15.02■□□□□ -0
CHMP4A-201ENST00000347519 FAM103A1Q9BTL3 118 aaKnown RBP15.02■□□□□ -0
CHMP4A-201ENST00000347519 RBKSQ9H477 322 aa15.02■□□□□ -0
CHMP4A-201ENST00000347519 HSPB7Q9UBY9 170 aa15.02■□□□□ -0
CHMP4A-201ENST00000347519 G3V3Q6 166 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 CLDN34H7C241 214 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 MAS1LP35410 378 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 NKX2-1P43699 371 aaPredicted RBP15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 RPL27AP46776 148 aaKnown RBP15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 UBA52P62987 128 aaKnown RBP15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 TNFRSF9Q07011 255 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 FXYD3Q14802 87 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 LRRC37A5PQ49AS3 106 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 C9orf152Q5JTZ5 239 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 ZNF562Q6V9R5 426 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 OR10W1Q8NGF6 305 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 OR1L8Q8NGR8 309 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 SRSF12Q8WXF0 261 aaKnown RBP15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 NEURL2Q9BR09 285 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 HINT2Q9BX68 163 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 COMMD5Q9GZQ3 224 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 NDUFA4L2Q9NRX3 87 aa15.01□□□□□ -0.01
CHMP4A-201ENST00000347519 TRAV14DV4A0A0A6YYC5 116 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 TEX22C9J3V5 150 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 H0YIZ8 118 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 K7EPK0 472 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 M0QZK8 103 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 CCNKO75909 580 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 CNIH1O95406 144 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 IFNA17P01571 189 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 FGF2P09038 288 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 APELAP0DMC3 54 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 SPCS3P61009 180 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 OR52E5Q8NH55 327 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 GRPEL2Q8TAA5 225 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 PPP1R1CQ8WVI7 109 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 FKBP11Q9NYL4 201 aa15□□□□□ -0.01
CHMP4A-201ENST00000347519 RCL1Q9Y2P8 373 aaKnown RBP15□□□□□ -0.01
CHMP4A-201ENST00000347519 ZNF257Q9Y2Q1 563 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms