RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ASCL2Q99929 193 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 MS4A5Q9H3V2 200 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 GNB4Q9HAV0 340 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 TMEM106BQ9NUM4 274 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 COL4A2P08572 1712 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 FGF16O43320 207 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 IGFBP2P18065 325 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 PAX9P55771 341 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 DAZAP2Q15038 168 aaPredicted RBP11.01□□□□□ -0.65
CASC4-202ENST00000345795 MMDQ15546 238 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 USF2Q15853 346 aaPredicted RBP11.01□□□□□ -0.65
CASC4-202ENST00000345795 DERL1Q9BUN8 251 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 WDR61Q9GZS3 305 aaKnown RBP11.01□□□□□ -0.65
CASC4-202ENST00000345795 RNF115Q9Y4L5 304 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 WNT2P09544 360 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 ARL14EPLP0DKL9 152 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 BCL2P10415 239 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 RAB5AP20339 215 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 DUTP33316 252 aaKnown RBP11.01□□□□□ -0.65
CASC4-202ENST00000345795 SUMO1P63165 101 aaKnown RBP11.01□□□□□ -0.65
CASC4-202ENST00000345795 ERHP84090 104 aaKnown RBP11.01□□□□□ -0.65
CASC4-202ENST00000345795 ARSJQ5FYB0 599 aaPredicted RBP11.01□□□□□ -0.65
CASC4-202ENST00000345795 SLC35E1Q96K37 410 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 GINS3Q9BRX5 216 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 PPP5D1E7EU14 171 aa11□□□□□ -0.65
CASC4-202ENST00000345795 FXYD3Q14802 87 aa11□□□□□ -0.65
CASC4-202ENST00000345795 ADIPOQQ15848 244 aa11□□□□□ -0.65
CASC4-202ENST00000345795 RPP25LQ8N5L8 163 aaKnown RBP11□□□□□ -0.65
CASC4-202ENST00000345795 OR10D4PQ8NGN7 298 aa11□□□□□ -0.65
CASC4-202ENST00000345795 OR2T6Q8NHC8 308 aa11□□□□□ -0.65
CASC4-202ENST00000345795 ZNF835Q9Y2P0 537 aa11□□□□□ -0.65
CASC4-202ENST00000345795 FLNBO75369 2602 aaKnown RBP11□□□□□ -0.65
CASC4-202ENST00000345795 IGHV1-69-2A0A0G2JMI3 117 aa11□□□□□ -0.65
CASC4-202ENST00000345795 MDFIC2A0A1B0GVS7 189 aa11□□□□□ -0.65
CASC4-202ENST00000345795 HPRT1P00492 218 aa11□□□□□ -0.65
CASC4-202ENST00000345795 MT-ND4LP03901 98 aa11□□□□□ -0.65
CASC4-202ENST00000345795 RANP62826 216 aaKnown RBP11□□□□□ -0.65
CASC4-202ENST00000345795 SPATA31B1PQ5VZV4 182 aa11□□□□□ -0.65
CASC4-202ENST00000345795 ZNF66Q6ZN08 573 aa11□□□□□ -0.65
CASC4-202ENST00000345795 SSX7Q7RTT5 188 aa11□□□□□ -0.65
CASC4-202ENST00000345795 PNKDQ8N490 385 aa11□□□□□ -0.65
CASC4-202ENST00000345795 GAL3ST2Q9H3Q3 398 aa11□□□□□ -0.65
CASC4-202ENST00000345795 MRGPRGQ86SM5 289 aa11□□□□□ -0.65
CASC4-202ENST00000345795 SH2D7A6NKC9 451 aaPredicted RBP10.99□□□□□ -0.65
CASC4-202ENST00000345795 CEACAM18A8MTB9 384 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 HIST1H2BAQ96A08 127 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 PRO1933Q9H354 126 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 ANAPC10Q9UM13 185 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 C1QTNF9P0C862 333 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 ERVFC1-1P60608 527 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 MALSU1Q96EH3 234 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 FAM210BQ96KR6 192 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 HES4Q9HCC6 221 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 GP6Q9HCN6 339 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 KIAA1456Q9P272 454 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 IGHV3-49A0A0A0MS15 119 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 KBTBD11-OT1A0A1B0GTJ5 212 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 MBD3L4A6NDZ8 208 aaPredicted RBP10.99□□□□□ -0.65
CASC4-202ENST00000345795 MBD3L3A6NE82 208 aaPredicted RBP10.99□□□□□ -0.65
CASC4-202ENST00000345795 MBD3L5A6NJ08 208 aaPredicted RBP10.99□□□□□ -0.65
CASC4-202ENST00000345795 MT-CO2P00403 227 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 LYZP61626 148 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 KLRD1Q13241 179 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 TMEM241Q24JQ0 296 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 KLF17Q5JT82 389 aaPredicted RBP10.99□□□□□ -0.65
CASC4-202ENST00000345795 MBD3L2Q8NHZ7 208 aaPredicted RBP10.99□□□□□ -0.65
CASC4-202ENST00000345795 ELOVL1Q9BW60 279 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 NPCDR1Q9BY65 106 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
CASC4-202ENST00000345795 PPP1R2P9O14990 202 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 COX7A2P2O60397 106 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 HTD2P86397 168 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 BSXQ3C1V8 233 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 TMEM41BQ5BJD5 291 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 MRPL41Q8IXM3 137 aaKnown RBP10.98□□□□□ -0.65
CASC4-202ENST00000345795 OR9G1Q8NH87 305 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 NPIPB3Q92617 1050 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 TRAV34A0A0B4J273 112 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 LCN2P80188 198 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 FLI1Q01543 452 aaPredicted RBP10.98□□□□□ -0.65
CASC4-202ENST00000345795 MEF2BQ02080 365 aaPredicted RBP10.98□□□□□ -0.65
CASC4-202ENST00000345795 ZNF90Q03938 601 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 HMGN3Q15651 99 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 SLC35E3Q7Z769 313 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 TMEM68Q96MH6 324 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 IDI2-AS1Q9NZ38 188 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 LINC00527Q9UJ94 153 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 IL15RAQ13261 267 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 HAPLN4Q86UW8 402 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 CUBNO60494 3623 aa10.98□□□□□ -0.65
CASC4-202ENST00000345795 EXPH5Q8NEV8 1989 aa10.97□□□□□ -0.65
CASC4-202ENST00000345795 TRBV23-1A0A0A0MS06 115 aa10.97□□□□□ -0.65
CASC4-202ENST00000345795 IGKV1D-33P01593 117 aa10.97□□□□□ -0.65
CASC4-202ENST00000345795 IGKV1-33P01594 117 aa10.97□□□□□ -0.65
CASC4-202ENST00000345795 RAB7AP51149 207 aa10.97□□□□□ -0.65
CASC4-202ENST00000345795 RND2P52198 227 aa10.97□□□□□ -0.65
CASC4-202ENST00000345795 ERVK11-1P61568 191 aa10.97□□□□□ -0.65
CASC4-202ENST00000345795 BATFQ16520 125 aa10.97□□□□□ -0.65
CASC4-202ENST00000345795 C5orf30Q96GV9 206 aa10.97□□□□□ -0.65
CASC4-202ENST00000345795 TIMD4Q96H15 378 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms