RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 PEX7O00628 323 aa14.8□□□□□ -0.04
SPAST-202ENST00000345662 EMP1P54849 157 aa14.8□□□□□ -0.04
SPAST-202ENST00000345662 DCAF10Q5QP82 559 aa14.8□□□□□ -0.04
SPAST-202ENST00000345662 GTF3AQ92664 365 aaKnown RBP14.8□□□□□ -0.04
SPAST-202ENST00000345662 FSCN3Q9NQT6 498 aa14.8□□□□□ -0.04
SPAST-202ENST00000345662 GPR6P46095 362 aaPredicted RBP14.8□□□□□ -0.04
SPAST-202ENST00000345662 HIST1H1AQ02539 215 aaPredicted RBP14.8□□□□□ -0.04
SPAST-202ENST00000345662 Q5PR19 223 aa14.8□□□□□ -0.04
SPAST-202ENST00000345662 FCGR2BP31994 310 aaPredicted RBP14.8□□□□□ -0.04
SPAST-202ENST00000345662 ADIPOQQ15848 244 aa14.8□□□□□ -0.04
SPAST-202ENST00000345662 LINC00305Q7Z4B0 112 aa14.8□□□□□ -0.04
SPAST-202ENST00000345662 CRXO43186 299 aaPredicted RBP14.8□□□□□ -0.04
SPAST-202ENST00000345662 IGFBP2P18065 325 aa14.8□□□□□ -0.04
SPAST-202ENST00000345662 PSG9Q00887 426 aa14.8□□□□□ -0.04
SPAST-202ENST00000345662 IGHV3-72A0A0B4J1Y9 119 aa14.8□□□□□ -0.04
SPAST-202ENST00000345662 SYNGR3O43761 229 aa14.8□□□□□ -0.04
SPAST-202ENST00000345662 CD3EP07766 207 aa14.8□□□□□ -0.04
SPAST-202ENST00000345662 OR10J3Q5JRS4 329 aa14.8□□□□□ -0.04
SPAST-202ENST00000345662 IGKV3-7A0A075B6H7 116 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 C17orf98A8MV24 154 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 LGALS3P17931 250 aaKnown RBP14.79□□□□□ -0.04
SPAST-202ENST00000345662 FAM131CQ96AQ9 280 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 PRELID3AQ96N28 172 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 CA1P00915 261 aaPredicted RBP14.79□□□□□ -0.04
SPAST-202ENST00000345662 MEGF9Q9H1U4 602 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 TMEM160Q9NX00 188 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 MRPL16Q9NX20 251 aaKnown RBP14.79□□□□□ -0.04
SPAST-202ENST00000345662 A0A1B0GUT8 65 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 LHFPL1Q86WI0 220 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 GDF15Q99988 308 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 RPP21Q9H633 154 aaKnown RBP14.79□□□□□ -0.04
SPAST-202ENST00000345662 C12orf77C9JDV5 145 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 NAPSAO96009 420 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 SUPT4H1P63272 117 aaKnown RBP14.79□□□□□ -0.04
SPAST-202ENST00000345662 SRSF4Q08170 494 aaKnown RBP14.79□□□□□ -0.04
SPAST-202ENST00000345662 AMMECR1LQ6DCA0 310 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 FAM214BQ7L5A3 538 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 ITLN1Q8WWA0 313 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 GNB1LQ9BYB4 327 aa14.79□□□□□ -0.04
SPAST-202ENST00000345662 SCN2AQ99250 2005 aa14.78□□□□□ -0.04
SPAST-202ENST00000345662 TRAV1-1A0A0B4J248 108 aa14.78□□□□□ -0.04
SPAST-202ENST00000345662 A0A0A6YYD4 124 aa14.78□□□□□ -0.04
SPAST-202ENST00000345662 IGKV1-9A0A0C4DH69 117 aa14.78□□□□□ -0.04
SPAST-202ENST00000345662 LEAP2Q969E1 77 aa14.78□□□□□ -0.04
SPAST-202ENST00000345662 GREB1LQ9C091 1923 aaPredicted RBP14.78□□□□□ -0.04
SPAST-202ENST00000345662 TGFBR3LH3BV60 316 aa14.78□□□□□ -0.04
SPAST-202ENST00000345662 F2RL2O00254 374 aa14.78□□□□□ -0.04
SPAST-202ENST00000345662 NBEAP1P0C6P0 100 aa14.78□□□□□ -0.04
SPAST-202ENST00000345662 CCL8P80075 99 aa14.78□□□□□ -0.04
SPAST-202ENST00000345662 TM4SF20Q53R12 229 aa14.78□□□□□ -0.04
SPAST-202ENST00000345662 RBBP6Q7Z6E9 1792 aaKnown RBP14.78□□□□□ -0.04
SPAST-202ENST00000345662 PRSS2P07478 247 aa14.78□□□□□ -0.04
SPAST-202ENST00000345662 OR4C13Q8NGP0 309 aa14.78□□□□□ -0.04
SPAST-202ENST00000345662 KLF14Q8TD94 323 aaPredicted RBP14.78□□□□□ -0.04
SPAST-202ENST00000345662 C18orf15Q96N68 181 aa14.78□□□□□ -0.04
SPAST-202ENST00000345662 RNASE7Q9H1E1 156 aaKnown RBP14.78□□□□□ -0.04
SPAST-202ENST00000345662 CCDC144NLQ6NUI1 221 aa14.77□□□□□ -0.04
SPAST-202ENST00000345662 IFI27L2Q9H2X8 130 aa14.77□□□□□ -0.04
SPAST-202ENST00000345662 OSTCQ9NRP0 149 aa14.77□□□□□ -0.04
SPAST-202ENST00000345662 IGKV1D-13A0A0B4J2D9 117 aa14.77□□□□□ -0.04
SPAST-202ENST00000345662 HIGD1CA8MV81 97 aa14.77□□□□□ -0.04
SPAST-202ENST00000345662 IGKV1-13P0DP09 117 aa14.77□□□□□ -0.04
SPAST-202ENST00000345662 SCGB1A1P11684 91 aa14.77□□□□□ -0.04
SPAST-202ENST00000345662 EAF1Q96JC9 268 aaPredicted RBP14.77□□□□□ -0.04
SPAST-202ENST00000345662 ECSCRQ19T08 205 aa14.77□□□□□ -0.05
SPAST-202ENST00000345662 TMEM30BQ3MIR4 351 aa14.77□□□□□ -0.05
SPAST-202ENST00000345662 MIR17HGQ75NE6 70 aa14.77□□□□□ -0.05
SPAST-202ENST00000345662 KLK15Q9H2R5 256 aa14.77□□□□□ -0.05
SPAST-202ENST00000345662 CHODLQ9H9P2 273 aa14.77□□□□□ -0.05
SPAST-202ENST00000345662 CCL1P22362 96 aa14.77□□□□□ -0.05
SPAST-202ENST00000345662 CX3CL1P78423 397 aa14.77□□□□□ -0.05
SPAST-202ENST00000345662 TEX38Q6PEX7 206 aa14.77□□□□□ -0.05
SPAST-202ENST00000345662 FNDC4Q9H6D8 234 aaPredicted RBP14.77□□□□□ -0.05
SPAST-202ENST00000345662 J3QW42 95 aa14.76□□□□□ -0.05
SPAST-202ENST00000345662 HILPDAQ9Y5L2 63 aa14.76□□□□□ -0.05
SPAST-202ENST00000345662 ZNF831Q5JPB2 1677 aa14.76□□□□□ -0.05
SPAST-202ENST00000345662 PLXNB2O15031 1838 aa14.76□□□□□ -0.05
SPAST-202ENST00000345662 OCC1Q8TAD7 63 aa14.76□□□□□ -0.05
SPAST-202ENST00000345662 TRBV20OR9-2A0A075B6H5 130 aa14.76□□□□□ -0.05
SPAST-202ENST00000345662 IGKV1D-8A0A087WSZ0 117 aa14.76□□□□□ -0.05
SPAST-202ENST00000345662 TRAV30A0A087WSZ9 112 aa14.76□□□□□ -0.05
SPAST-202ENST00000345662 IGHV3-48P01763 117 aa14.76□□□□□ -0.05
SPAST-202ENST00000345662 RPL39P5Q59GN2 51 aa14.76□□□□□ -0.05
SPAST-202ENST00000345662 A0A1B0GW15 77 aa14.76□□□□□ -0.05
SPAST-202ENST00000345662 MRPL52Q86TS9 123 aaKnown RBP14.76□□□□□ -0.05
SPAST-202ENST00000345662 ZNF418Q8TF45 676 aaPredicted RBP14.76□□□□□ -0.05
SPAST-202ENST00000345662 ZNF257Q9Y2Q1 563 aa14.76□□□□□ -0.05
SPAST-202ENST00000345662 COL4A5P29400 1685 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 GFRA1P56159 465 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 ZNF664Q8N3J9 261 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 OR5A1Q8NGJ0 315 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 DIRC2Q96SL1 478 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 VSIRQ9H7M9 311 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 PGPEP1LA6NFU8 196 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 MOSP00540 346 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 REG1AP05451 166 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 RIPPLY3P57055 190 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 RELQ04864 619 aaPredicted RBP14.75□□□□□ -0.05
SPAST-202ENST00000345662 SLC25A53Q5H9E4 307 aa14.75□□□□□ -0.05
SPAST-202ENST00000345662 DUSP15Q9H1R2 295 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms