RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PNKDQ8N490 385 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 KLK10O43240 276 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 MGAT2Q10469 447 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 PLA2G3Q9NZ20 509 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 FCGR2BP31994 310 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-201ENST00000345617 PRDM14Q9GZV8 571 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 CYSLTR1Q9Y271 337 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 IGHMP01871 453 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 OR10J3Q5JRS4 329 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 RNF182Q8N6D2 247 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 FBLN7Q53RD9 439 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 KIR3DL3Q8N743 410 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 PHLDA1Q8WV24 401 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-201ENST00000345617 Q96M66 194 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 SF3B6Q9Y3B4 125 aaKnown RBP16.64■□□□□ 0.25
HDAC4-201ENST00000345617 LOC105371267A0A1B0GV96 52 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 AMER3Q8N944 861 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 OR13C6PQ8NH95 151 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 CHCHD1Q96BP2 118 aaKnown RBP16.64■□□□□ 0.25
HDAC4-201ENST00000345617 SMPXQ9UHP9 88 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 GREB1LQ9C091 1923 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-201ENST00000345617 FXYD3Q14802 87 aa16.64■□□□□ 0.25
HDAC4-201ENST00000345617 SRSF4Q08170 494 aaKnown RBP16.63■□□□□ 0.25
HDAC4-201ENST00000345617 MYEOVQ96EZ4 313 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 CRYBB3P26998 211 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 ACSF3Q4G176 576 aaPredicted RBP16.63■□□□□ 0.25
HDAC4-201ENST00000345617 TDHQ8IZJ6 230 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 GCHFRP30047 84 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 CTSSP25774 331 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 OR9G4Q8NGQ1 327 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 RTN4RQ9BZR6 473 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 ZNF124Q15973 351 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 IZUMO1RA6ND01 250 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 OR2H2O95918 312 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 IFITM2Q01629 132 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 NXT2Q9NPJ8 142 aaKnown RBP16.63■□□□□ 0.25
HDAC4-201ENST00000345617 ADAMTS7Q9UKP4 1686 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 SSTR5P35346 364 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 GNB1LQ9BYB4 327 aa16.63■□□□□ 0.25
HDAC4-201ENST00000345617 WNT10AQ9GZT5 417 aa16.62■□□□□ 0.25
HDAC4-201ENST00000345617 RPP21Q9H633 154 aaKnown RBP16.62■□□□□ 0.25
HDAC4-201ENST00000345617 NCOA6Q14686 2063 aaPredicted RBP16.62■□□□□ 0.25
HDAC4-201ENST00000345617 C14orf144Q96I85 54 aa16.62■□□□□ 0.25
HDAC4-201ENST00000345617 RASL11AQ6T310 242 aa16.62■□□□□ 0.25
HDAC4-201ENST00000345617 C1QL4Q86Z23 238 aa16.62■□□□□ 0.25
HDAC4-201ENST00000345617 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.62■□□□□ 0.25
HDAC4-201ENST00000345617 TRAV9-2A0A087WT02 112 aa16.62■□□□□ 0.25
HDAC4-201ENST00000345617 APELAP0DMC3 54 aa16.62■□□□□ 0.25
HDAC4-201ENST00000345617 CACNG8Q8WXS5 425 aa16.62■□□□□ 0.25
HDAC4-201ENST00000345617 C16orf97H3BN30 126 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 MDKP21741 143 aaPredicted RBP16.61■□□□□ 0.25
HDAC4-201ENST00000345617 CACNG7P62955 275 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 JPT1Q9UK76 154 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 MALRD1Q5VYJ5 2156 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 PPIAL4EA0A075B759 164 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 PPIAL4DF5H284 164 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 PPIAL4FP0DN26 164 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 SCGB3A1Q96QR1 104 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 PPIAL4AQ9Y536 164 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 LINC00587B1AMM8 73 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 CKS1BP61024 79 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 TMEM187Q14656 261 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 PLAC1Q9HBJ0 212 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 MS4A6AQ9H2W1 248 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 TRBV23-1A0A0A0MS06 115 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 CEACAM4O75871 244 aa16.61■□□□□ 0.25
HDAC4-201ENST00000345617 NKX2-8O15522 239 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 SYNGR3O43761 229 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 C1QAP02745 245 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 GAGE2BQ13066 116 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 SRSF6Q13247 344 aaKnown RBP16.6■□□□□ 0.25
HDAC4-201ENST00000345617 GAGE2EQ4V326 116 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 GOLT1AQ6ZVE7 132 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 TMEM186Q96B77 213 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 GAGE2DQ9UEU5 116 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 A0A1W2PP11 408 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 MEX3AA1L020 520 aaKnown RBP16.6■□□□□ 0.25
HDAC4-201ENST00000345617 ATP5L2Q7Z4Y8 100 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 COX5BP10606 129 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 GUSBP11Q6P575 273 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 FAM90A27PA6NNH2 459 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 CXorf66Q5JRM2 361 aaPredicted RBP16.6■□□□□ 0.25
HDAC4-201ENST00000345617 TMEM240Q5SV17 173 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 C9orf40Q8IXQ3 194 aa16.6■□□□□ 0.25
HDAC4-201ENST00000345617 TRBV7-9A0A0J9YWB2 115 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 GFRA1P56159 465 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 FUT5Q11128 374 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 LINC00305Q7Z4B0 112 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 APOBEC4Q8WW27 367 aaKnown RBP16.59■□□□□ 0.25
HDAC4-201ENST00000345617 EEF1AKMT3Q96AZ1 226 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 TRAV8-4A0A0B4J246 113 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 A8MWV9 139 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 HYAL3O43820 417 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-201ENST00000345617 CISD3P0C7P0 127 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 PATE4P0C8F1 98 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 SIP14410 1827 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 PLPPR1Q8TBJ4 325 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 LGALS1P09382 135 aaKnown RBP16.59■□□□□ 0.25
HDAC4-201ENST00000345617 TNFRSF18Q9Y5U5 241 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 hCG_38984A0A1B0GV85 526 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms