RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 MSGN1A6NI15 193 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 L7N2F9 121 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 NDUFA3O95167 84 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 IFNA17P01571 189 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 FGF2P09038 288 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 FAM106CPP0CH98 169 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 MYOD1P15172 320 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 RPL8P62917 257 aaKnown RBP13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 VAMP2P63027 116 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 KRTAP1-1Q07627 177 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 ZNF345Q14585 488 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 MMDQ15546 238 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 AQP10Q96PS8 301 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 ZNF430Q9H8G1 570 aaPredicted RBP13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 METTL1Q9UBP6 276 aaKnown RBP13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 NUP50Q9UKX7 468 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 TCF19Q9Y242 345 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 SIGLEC9Q9Y336 463 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 TEX50A0A1B0GTY4 177 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 RRHO14718 337 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 NBR2O15453 112 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 OR2F2O95006 317 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 FBP1P09467 338 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 HKR1P10072 659 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 IAPPP10997 89 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 TMEM11P17152 192 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 NUP62P37198 522 aaPredicted RBP13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 OR2F1Q13607 317 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 SPINK9Q5DT21 86 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 DTD1Q8TEA8 209 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 ZDHHC16Q969W1 377 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 SMIM8Q96KF7 97 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 FBXL15Q9H469 300 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 LYRM2Q9NU23 88 aaPredicted RBP13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 WSB1Q9Y6I7 421 aa13.06□□□□□ -0.32
CEACAM1-202ENST00000344391 MXRA5Q9NR99 2828 aa13.05□□□□□ -0.32
CEACAM1-202ENST00000344391 CEBPZOSA8MTT3 80 aa13.05□□□□□ -0.32
CEACAM1-202ENST00000344391 RPL12P30050 165 aaKnown RBP13.05□□□□□ -0.32
CEACAM1-202ENST00000344391 AP2S1P53680 142 aaPredicted RBP13.05□□□□□ -0.32
CEACAM1-202ENST00000344391 TAS2R30P59541 319 aa13.05□□□□□ -0.32
CEACAM1-202ENST00000344391 PJVKQ0ZLH3 352 aa13.05□□□□□ -0.32
CEACAM1-202ENST00000344391 PRSS8Q16651 343 aa13.05□□□□□ -0.32
CEACAM1-202ENST00000344391 PPP1R27Q86WC6 154 aa13.05□□□□□ -0.32
CEACAM1-202ENST00000344391 MMD2Q8IY49 270 aa13.05□□□□□ -0.32
CEACAM1-202ENST00000344391 KCNRGQ8N5I3 272 aa13.05□□□□□ -0.32
CEACAM1-202ENST00000344391 OR2C3Q8N628 320 aa13.05□□□□□ -0.32
CEACAM1-202ENST00000344391 OR5B3Q8NH48 314 aa13.05□□□□□ -0.32
CEACAM1-202ENST00000344391 PIFOQ8TCI5 191 aa13.05□□□□□ -0.32
CEACAM1-202ENST00000344391 A0A0D9SG52 128 aa13.04□□□□□ -0.32
CEACAM1-202ENST00000344391 FAM24AA6NFZ4 105 aa13.04□□□□□ -0.32
CEACAM1-202ENST00000344391 CD5LO43866 347 aa13.04□□□□□ -0.32
CEACAM1-202ENST00000344391 GPR137BO60478 399 aa13.04□□□□□ -0.32
CEACAM1-202ENST00000344391 RPL23AP62750 156 aaKnown RBP13.04□□□□□ -0.32
CEACAM1-202ENST00000344391 C9orf139Q6ZV77 190 aa13.04□□□□□ -0.32
CEACAM1-202ENST00000344391 TMUB2Q71RG4 321 aa13.04□□□□□ -0.32
CEACAM1-202ENST00000344391 CIB3Q96Q77 187 aaPredicted RBP13.04□□□□□ -0.32
CEACAM1-202ENST00000344391 COMMD5Q9GZQ3 224 aa13.04□□□□□ -0.32
CEACAM1-202ENST00000344391 KIAA1456Q9P272 454 aa13.04□□□□□ -0.32
CEACAM1-202ENST00000344391 ZFHX3Q15911 3703 aa13.04□□□□□ -0.32
CEACAM1-202ENST00000344391 OPN1MWP04001 364 aa13.03□□□□□ -0.32
CEACAM1-202ENST00000344391 OPN1MW2P0DN77 364 aa13.03□□□□□ -0.32
CEACAM1-202ENST00000344391 OPN1MW3P0DN78 364 aa13.03□□□□□ -0.32
CEACAM1-202ENST00000344391 S100A11P31949 105 aa13.03□□□□□ -0.32
CEACAM1-202ENST00000344391 VDAC2P45880 294 aaPredicted RBP13.03□□□□□ -0.32
CEACAM1-202ENST00000344391 CAV2P51636 162 aa13.03□□□□□ -0.32
CEACAM1-202ENST00000344391 PRCDQ00LT1 54 aa13.03□□□□□ -0.32
CEACAM1-202ENST00000344391 AANATQ16613 207 aa13.03□□□□□ -0.32
CEACAM1-202ENST00000344391 OR8H1Q8NGG4 311 aa13.03□□□□□ -0.32
CEACAM1-202ENST00000344391 SSX3Q99909 188 aa13.03□□□□□ -0.32
CEACAM1-202ENST00000344391 ARL6Q9H0F7 186 aa13.03□□□□□ -0.32
CEACAM1-202ENST00000344391 PSENENQ9NZ42 101 aa13.03□□□□□ -0.32
CEACAM1-202ENST00000344391 H3BP45 60 aa13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 TSC22D2O75157 780 aa13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 LY86O95711 162 aa13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 MAS1LP35410 378 aa13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 PLGLAQ15195 96 aa13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 C5orf64Q2M2E5 130 aa13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 LRRC75BQ2VPJ9 315 aa13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 BCL6BQ8N143 479 aaPredicted RBP13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 TMEM252Q8N6L7 170 aa13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 OR1L8Q8NGR8 309 aa13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 CLCC1Q96S66 551 aa13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 NDUFA4L2Q9NRX3 87 aa13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 C1RLQ9NZP8 487 aa13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 NAV3Q8IVL0 2385 aa13.02□□□□□ -0.32
CEACAM1-202ENST00000344391 IGSF23A1L1A6 192 aa13.02□□□□□ -0.33
CEACAM1-202ENST00000344391 E7EUB6 86 aa13.02□□□□□ -0.33
CEACAM1-202ENST00000344391 FCN1O00602 326 aa13.02□□□□□ -0.33
CEACAM1-202ENST00000344391 OPCMLQ14982 345 aa13.02□□□□□ -0.33
CEACAM1-202ENST00000344391 DEFB112Q30KQ8 113 aa13.02□□□□□ -0.33
CEACAM1-202ENST00000344391 C10orf55Q5SWW7 151 aa13.02□□□□□ -0.33
CEACAM1-202ENST00000344391 TEX29Q8N6K0 151 aa13.02□□□□□ -0.33
CEACAM1-202ENST00000344391 HINT2Q9BX68 163 aa13.02□□□□□ -0.33
CEACAM1-202ENST00000344391 SLC25A31Q9H0C2 315 aa13.02□□□□□ -0.33
CEACAM1-202ENST00000344391 CGB1A6NKQ9 187 aa13.01□□□□□ -0.33
CEACAM1-202ENST00000344391 NCBP2LA6PVI3 153 aaKnown RBP13.01□□□□□ -0.33
CEACAM1-202ENST00000344391 C4BPBP20851 252 aa13.01□□□□□ -0.33
CEACAM1-202ENST00000344391 HOXA1P49639 335 aaPredicted RBP13.01□□□□□ -0.33
CEACAM1-202ENST00000344391 SSBP2P81877 361 aaPredicted RBP13.01□□□□□ -0.33
CEACAM1-202ENST00000344391 EWSR1Q01844 656 aaKnown RBP eCLIP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms