RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 FUT5Q11128 374 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 FBXL14Q8N1E6 418 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 BCORP1Q8N888 145 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 DEPPQ9NTK1 212 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 SS18L2Q9UHA2 77 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 AWAT1Q58HT5 328 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 GLIPR1L1Q6UWM5 242 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 LRRC25Q8N386 305 aaPredicted RBP3.04□□□□□ -1.92
SYNE1-201ENST00000341594 BORCS8Q96FH0 119 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 BARX1Q9HBU1 254 aaPredicted RBP3.04□□□□□ -1.92
SYNE1-201ENST00000341594 USP9XQ93008 2570 aaPredicted RBP3.04□□□□□ -1.92
SYNE1-201ENST00000341594 PAGE4O60829 102 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 SCCPDHQ8NBX0 429 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 OR1P1Q8NH06 330 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 SLC7A10Q9NS82 523 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 HPRT1P00492 218 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 C20orf173Q96LM9 149 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 WIPF1O43516 503 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 LPAR6P43657 344 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 CCR5P51681 352 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 GNG3P63215 75 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF114Q8NC26 417 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 EEF1AKMT3Q96AZ1 226 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 HIST1H4GQ99525 98 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 DAPP1Q9UN19 280 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 APCP25054 2843 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 SSSCA1O60232 199 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 DEFA4P12838 97 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 LSM6P62312 80 aaKnown RBP3.04□□□□□ -1.92
SYNE1-201ENST00000341594 SELENOTP62341 195 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 TPRX1Q8N7U7 411 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 SMPXQ9UHP9 88 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 OR2W1Q9Y3N9 320 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 A0A1W2PRS3 328 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 CORTO00230 105 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 NKX2-4Q9H2Z4 354 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 SAA2-SAA4A0A096LPE2 208 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 IL15RAQ13261 267 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 TMEM256Q8N2U0 113 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 A0A0J9YW62 118 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 CNN1P51911 297 aaKnown RBP3.04□□□□□ -1.92
SYNE1-201ENST00000341594 P2RY6Q15077 328 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 OR2K2Q8NGT1 345 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF576Q9H609 170 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 FFAR1O14842 300 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 IGHV4-39P01824 125 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 TAS2R45P59539 299 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 SLC16A11Q8NCK7 471 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 IL4P05112 153 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 LHX4Q969G2 390 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 MRPS18BQ9Y676 258 aaKnown RBP3.04□□□□□ -1.92
SYNE1-201ENST00000341594 APOMO95445 188 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 ATP5G1P05496 136 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 CELA2BP08218 269 aaPredicted RBP3.04□□□□□ -1.92
SYNE1-201ENST00000341594 ATP5G3P48201 142 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 ATP5G2Q06055 141 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 GPX4P36969 197 aaPredicted RBP3.04□□□□□ -1.92
SYNE1-201ENST00000341594 FMODQ06828 376 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 MESP2Q0VG99 397 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 C16orf82Q7Z2V1 217 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 OR1L8Q8NGR8 309 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 OR2V2Q96R30 315 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 TAAR6Q96RI8 345 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 TMEM106BQ9NUM4 274 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 GPR75O95800 540 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 ACP1P24666 158 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 IL2RGP31785 369 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 CSN1S1P47710 185 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 DCAF12Q5T6F0 453 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF253O75346 499 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 CLDN18P56856 261 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 C5orf17Q8NAS9 161 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF501Q96CX3 271 aaPredicted RBP3.04□□□□□ -1.92
SYNE1-201ENST00000341594 GPR3P46089 330 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 PLA2G2FQ9BZM2 168 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 EFNA3P52797 238 aa3.04□□□□□ -1.92
SYNE1-201ENST00000341594 WIPF2Q8TF74 440 aaPredicted RBP3.04□□□□□ -1.92
SYNE1-201ENST00000341594 NPIPB15A6NHN6 443 aaPredicted RBP3.03□□□□□ -1.92
SYNE1-201ENST00000341594 RPL27P61353 136 aaKnown RBP3.03□□□□□ -1.92
SYNE1-201ENST00000341594 ODF1Q14990 250 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 PRSS3P2Q8NHM4 247 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 PRTFDC1Q9NRG1 225 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 UBE2L5PA0A1B0GUS4 154 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 CRYBA2P53672 197 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 RHOGP84095 191 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 OR10J3Q5JRS4 329 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 OOSP2Q86WS3 158 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 WDFY1Q8IWB7 410 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 HIST3H2BBQ8N257 126 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 HIST1H2BKO60814 126 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 HIST1H2BJP06899 126 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 HIST1H2BOP23527 126 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 HIST1H2BBP33778 126 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 HIST1H2BDP58876 126 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 HIST1H2BCP62807 126 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 HIST2H2BEQ16778 126 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.03□□□□□ -1.92
SYNE1-201ENST00000341594 UNQ5815/PRO19632Q6UWF5 114 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 HIST1H2BHQ93079 126 aa3.03□□□□□ -1.92
SYNE1-201ENST00000341594 HIST1H2BNQ99877 126 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms