RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 HOXA4Q00056 320 aaPredicted RBP16.26■□□□□ 0.19
CDK13-202ENST00000340829 VPS25Q9BRG1 176 aa16.26■□□□□ 0.19
CDK13-202ENST00000340829 DIRC3C9JPN6 131 aa16.26■□□□□ 0.19
CDK13-202ENST00000340829 UNQ5815/PRO19632Q6UWF5 114 aa16.26■□□□□ 0.19
CDK13-202ENST00000340829 SRP19P09132 144 aaKnown RBP16.26■□□□□ 0.19
CDK13-202ENST00000340829 TRGC1P0CF51 173 aa16.26■□□□□ 0.19
CDK13-202ENST00000340829 HTN1P15515 57 aa16.26■□□□□ 0.19
CDK13-202ENST00000340829 WDR82Q6UXN9 313 aa16.26■□□□□ 0.19
CDK13-202ENST00000340829 ZNF525Q8N782 197 aa16.26■□□□□ 0.19
CDK13-202ENST00000340829 APOBEC3AP31941 199 aaPredicted RBP16.26■□□□□ 0.19
CDK13-202ENST00000340829 TMEM116Q8NCL8 245 aa16.26■□□□□ 0.19
CDK13-202ENST00000340829 OR51G1Q8NGK1 321 aa16.26■□□□□ 0.19
CDK13-202ENST00000340829 MRPL18Q9H0U6 180 aaKnown RBP16.26■□□□□ 0.19
CDK13-202ENST00000340829 TMEM250H0YL14 139 aa16.25■□□□□ 0.19
CDK13-202ENST00000340829 MT-ND6P03923 174 aa16.25■□□□□ 0.19
CDK13-202ENST00000340829 LIPFP07098 398 aa16.25■□□□□ 0.19
CDK13-202ENST00000340829 ZNF497Q6ZNH5 498 aa16.25■□□□□ 0.19
CDK13-202ENST00000340829 OR4C5Q8NGB2 326 aa16.25■□□□□ 0.19
CDK13-202ENST00000340829 LOC105371242A0A075B767 164 aa16.25■□□□□ 0.19
CDK13-202ENST00000340829 GFRA1P56159 465 aa16.25■□□□□ 0.19
CDK13-202ENST00000340829 OR8A1Q8NGG7 326 aa16.25■□□□□ 0.19
CDK13-202ENST00000340829 BET1LQ9NYM9 111 aa16.25■□□□□ 0.19
CDK13-202ENST00000340829 SPTBN1Q01082 2364 aaKnown RBP16.25■□□□□ 0.19
CDK13-202ENST00000340829 CLEC2AQ6UVW9 174 aa16.25■□□□□ 0.19
CDK13-202ENST00000340829 ATXN7O15265 892 aaPredicted RBP16.24■□□□□ 0.19
CDK13-202ENST00000340829 LOXL3P58215 753 aa16.24■□□□□ 0.19
CDK13-202ENST00000340829 F8VVB4 439 aa16.24■□□□□ 0.19
CDK13-202ENST00000340829 F8VWA3 439 aa16.24■□□□□ 0.19
CDK13-202ENST00000340829 SUPT4H1P63272 117 aaKnown RBP16.24■□□□□ 0.19
CDK13-202ENST00000340829 LHFPL1Q86WI0 220 aa16.24■□□□□ 0.19
CDK13-202ENST00000340829 HSPB7Q9UBY9 170 aa16.24■□□□□ 0.19
CDK13-202ENST00000340829 PHF3Q92576 2039 aaKnown RBP16.24■□□□□ 0.19
CDK13-202ENST00000340829 RAMP3O60896 148 aa16.24■□□□□ 0.19
CDK13-202ENST00000340829 IGFBP2P18065 325 aa16.24■□□□□ 0.19
CDK13-202ENST00000340829 VOPP1Q96AW1 172 aa16.24■□□□□ 0.19
CDK13-202ENST00000340829 LOC389332A0A1B0GUA5 103 aa16.24■□□□□ 0.19
CDK13-202ENST00000340829 KIAA1644Q3SXP7 199 aa16.24■□□□□ 0.19
CDK13-202ENST00000340829 WFIKKN1Q96NZ8 548 aa16.24■□□□□ 0.19
CDK13-202ENST00000340829 SH2D7A6NKC9 451 aaPredicted RBP16.23■□□□□ 0.19
CDK13-202ENST00000340829 ZCCHC24Q8N2G6 241 aaKnown RBP16.23■□□□□ 0.19
CDK13-202ENST00000340829 SFRP2Q96HF1 295 aa16.23■□□□□ 0.19
CDK13-202ENST00000340829 FOXF2Q12947 444 aa16.23■□□□□ 0.19
CDK13-202ENST00000340829 TMEM177Q53S58 311 aa16.23■□□□□ 0.19
CDK13-202ENST00000340829 OSR1Q8TAX0 266 aaPredicted RBP16.23■□□□□ 0.19
CDK13-202ENST00000340829 TMEM189A5PLL7 270 aa16.23■□□□□ 0.19
CDK13-202ENST00000340829 PPOXP50336 477 aa16.23■□□□□ 0.19
CDK13-202ENST00000340829 MFAP4P55083 255 aa16.23■□□□□ 0.19
CDK13-202ENST00000340829 PAFAH1B2P68402 229 aa16.23■□□□□ 0.19
CDK13-202ENST00000340829 LINC00518Q8N0U6 118 aa16.23■□□□□ 0.19
CDK13-202ENST00000340829 BMPERQ8N8U9 685 aa16.23■□□□□ 0.19
CDK13-202ENST00000340829 GATAD1Q8WUU5 269 aa16.23■□□□□ 0.19
CDK13-202ENST00000340829 IGHV3-35A0A0C4DH35 117 aa16.22■□□□□ 0.19
CDK13-202ENST00000340829 MGPP08493 103 aa16.22■□□□□ 0.19
CDK13-202ENST00000340829 CD81P60033 236 aa16.22■□□□□ 0.19
CDK13-202ENST00000340829 TMEM97Q5BJF2 176 aa16.22■□□□□ 0.19
CDK13-202ENST00000340829 MPDZO75970 2070 aa16.22■□□□□ 0.19
CDK13-202ENST00000340829 ZNF385CQ66K41 422 aaPredicted RBP16.22■□□□□ 0.19
CDK13-202ENST00000340829 EIF4E3Q8N5X7 224 aaKnown RBP16.22■□□□□ 0.19
CDK13-202ENST00000340829 CGB1A6NKQ9 187 aa16.22■□□□□ 0.19
CDK13-202ENST00000340829 TM4SF5O14894 197 aa16.22■□□□□ 0.19
CDK13-202ENST00000340829 GTF3AQ92664 365 aaKnown RBP16.22■□□□□ 0.19
CDK13-202ENST00000340829 PGLYRP4Q96LB8 373 aa16.22■□□□□ 0.19
CDK13-202ENST00000340829 MRPL20Q9BYC9 149 aaKnown RBP16.22■□□□□ 0.19
CDK13-202ENST00000340829 HLA-DQA1P01909 254 aa16.22■□□□□ 0.19
CDK13-202ENST00000340829 CENPWQ5EE01 88 aa16.22■□□□□ 0.19
CDK13-202ENST00000340829 SPANXN1Q5VSR9 72 aa16.22■□□□□ 0.19
CDK13-202ENST00000340829 ZNF324BQ6AW86 544 aaPredicted RBP16.22■□□□□ 0.19
CDK13-202ENST00000340829 CLDND2Q8NHS1 167 aa16.22■□□□□ 0.19
CDK13-202ENST00000340829 SSBP3Q9BWW4 388 aaPredicted RBP16.22■□□□□ 0.19
CDK13-202ENST00000340829 MRPL37Q9BZE1 423 aaKnown RBP16.22■□□□□ 0.19
CDK13-202ENST00000340829 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.21■□□□□ 0.19
CDK13-202ENST00000340829 PF4V1P10720 104 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 CCL3L1P16619 93 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 CDX1P47902 265 aaPredicted RBP16.21■□□□□ 0.19
CDK13-202ENST00000340829 C19orf24Q9BVV8 132 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 IFI27L2Q9H2X8 130 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 ANAPC1Q9H1A4 1944 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 IGHV1-18A0A0C4DH31 117 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 GRIFINA4D1Z8 144 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 C17orf100A8MU93 164 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 CGAP01215 116 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 CD55P08174 381 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.21■□□□□ 0.19
CDK13-202ENST00000340829 NBASA2RRP1 2371 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 KLRB1Q12918 225 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 Q1RN00 199 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 WFDC1Q9HC57 220 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 HSPB8Q9UJY1 196 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 NOTCH4Q99466 2003 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 TWIST1Q15672 202 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 FBXL15Q9H469 300 aa16.21■□□□□ 0.19
CDK13-202ENST00000340829 ID3Q02535 119 aa16.2■□□□□ 0.18
CDK13-202ENST00000340829 CYP2G1PQ6ZSU1 146 aa16.2■□□□□ 0.18
CDK13-202ENST00000340829 C5orf24Q7Z6I8 188 aa16.2■□□□□ 0.18
CDK13-202ENST00000340829 FAM90A1Q86YD7 464 aa16.2■□□□□ 0.18
CDK13-202ENST00000340829 WISP1O95388 367 aa16.2■□□□□ 0.18
CDK13-202ENST00000340829 COMPP49747 757 aaPredicted RBP16.2■□□□□ 0.18
CDK13-202ENST00000340829 DNM1P46Q6ZS02 220 aa16.2■□□□□ 0.18
CDK13-202ENST00000340829 LINC00305Q7Z4B0 112 aa16.2■□□□□ 0.18
CDK13-202ENST00000340829 MRPL32Q9BYC8 188 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms