RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 IMMP1LQ96LU5 166 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 ZNF430Q9H8G1 570 aaPredicted RBP12.51□□□□□ -0.41
RRP1B-201ENST00000340648 HIGD1AQ9Y241 93 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 UFC1Q9Y3C8 167 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 ORM1P02763 201 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 FOXA3P55318 350 aaPredicted RBP12.51□□□□□ -0.41
RRP1B-201ENST00000340648 ST6GALNAC3Q8NDV1 305 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 SIGLEC12Q96PQ1 595 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 FBLL1A6NHQ2 334 aaKnown RBP12.51□□□□□ -0.41
RRP1B-201ENST00000340648 ZNRF1Q8ND25 227 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 INSIG2Q9Y5U4 225 aa12.51□□□□□ -0.41
RRP1B-201ENST00000340648 MKRN2OSH3BPM6 223 aa12.5□□□□□ -0.41
RRP1B-201ENST00000340648 NMSQ5H8A3 153 aa12.5□□□□□ -0.41
RRP1B-201ENST00000340648 MRPL14Q6P1L8 145 aaKnown RBP12.5□□□□□ -0.41
RRP1B-201ENST00000340648 C12orf54Q6X4T0 127 aa12.5□□□□□ -0.41
RRP1B-201ENST00000340648 TMEM106BQ9NUM4 274 aa12.5□□□□□ -0.41
RRP1B-201ENST00000340648 SPEM2Q0P670 501 aa12.5□□□□□ -0.41
RRP1B-201ENST00000340648 UMODP07911 640 aa12.5□□□□□ -0.41
RRP1B-201ENST00000340648 SELENOTP62341 195 aa12.5□□□□□ -0.41
RRP1B-201ENST00000340648 LURAP1LQ8IV03 231 aa12.5□□□□□ -0.41
RRP1B-201ENST00000340648 ZNF703Q9H7S9 590 aaPredicted RBP12.5□□□□□ -0.41
RRP1B-201ENST00000340648 GAGE10A6NGK3 116 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 E9PLN8 166 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 TMEM116Q8NCL8 245 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 DEFB124Q8NES8 71 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 CLDN16Q9Y5I7 305 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 COL4A6Q14031 1691 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 OR4A8P0C604 315 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 BTF3P20290 206 aaKnown RBP12.49□□□□□ -0.41
RRP1B-201ENST00000340648 C10orf91Q5T1B1 145 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 ST6GALNAC6Q969X2 333 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 NEU1Q99519 415 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 IER2Q9BTL4 223 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 TNFRSF19Q9NS68 423 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 TRAV1-1A0A0B4J248 108 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 A6NNC1 897 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 REG1AP05451 166 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 MIR17HGQ75NE6 70 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 SFXN3Q9BWM7 321 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 PILRBQ9UKJ0 227 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 CEACAM1P13688 526 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 ACP7Q6ZNF0 438 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 ZNF714Q96N38 554 aa12.49□□□□□ -0.41
RRP1B-201ENST00000340648 HEATR5AQ86XA9 2040 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 ZNF716A6NP11 495 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 TFF1P04155 84 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 LINC00271P0C7V0 271 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 GATA2P23769 480 aaPredicted RBP12.48□□□□□ -0.41
RRP1B-201ENST00000340648 RPP25LQ8N5L8 163 aaKnown RBP12.48□□□□□ -0.41
RRP1B-201ENST00000340648 CLEC5AQ9NY25 188 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 ZFP30Q9Y2G7 519 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 FNDC1Q4ZHG4 1894 aaPredicted RBP12.48□□□□□ -0.41
RRP1B-201ENST00000340648 M0R296 226 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 ZNF146Q15072 292 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 SPSB3Q6PJ21 355 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 PET117Q6UWS5 81 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 NPIPB3Q92617 1050 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 RNASE7Q9H1E1 156 aaKnown RBP12.48□□□□□ -0.41
RRP1B-201ENST00000340648 PHF3Q92576 2039 aaKnown RBP12.48□□□□□ -0.41
RRP1B-201ENST00000340648 RPL27AP46776 148 aaKnown RBP12.48□□□□□ -0.41
RRP1B-201ENST00000340648 COMPP49747 757 aaPredicted RBP12.48□□□□□ -0.41
RRP1B-201ENST00000340648 GNB2P62879 340 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 TRIP6Q15654 476 aaKnown RBP12.48□□□□□ -0.41
RRP1B-201ENST00000340648 NRN1LQ496H8 165 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 NRN1Q9NPD7 142 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 DEPPQ9NTK1 212 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 IDI2-AS1Q9NZ38 188 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 KLK10O43240 276 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 CELA3BP08861 270 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 SCGB1C2P0DMR2 95 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 SNRNP40Q96DI7 357 aaKnown RBP12.48□□□□□ -0.41
RRP1B-201ENST00000340648 KCNS1Q96KK3 526 aa12.48□□□□□ -0.41
RRP1B-201ENST00000340648 SLC25A17O43808 307 aa12.47□□□□□ -0.41
RRP1B-201ENST00000340648 THYN1Q9P016 225 aa12.47□□□□□ -0.41
RRP1B-201ENST00000340648 OCC1Q8TAD7 63 aa12.47□□□□□ -0.41
RRP1B-201ENST00000340648 THSD7BQ9C0I4 1608 aa12.47□□□□□ -0.41
RRP1B-201ENST00000340648 LTBRP36941 435 aa12.47□□□□□ -0.41
RRP1B-201ENST00000340648 Q1RN00 199 aa12.47□□□□□ -0.41
RRP1B-201ENST00000340648 ATP1A1-AS1Q5TC04 95 aa12.47□□□□□ -0.41
RRP1B-201ENST00000340648 PSG7Q13046 419 aa12.47□□□□□ -0.41
RRP1B-201ENST00000340648 RAB37Q96AX2 223 aa12.47□□□□□ -0.41
RRP1B-201ENST00000340648 OR4C46A6NHA9 309 aa12.46□□□□□ -0.41
RRP1B-201ENST00000340648 PPIHO43447 177 aaKnown RBP12.46□□□□□ -0.41
RRP1B-201ENST00000340648 SMIM17P0DL12 118 aa12.46□□□□□ -0.41
RRP1B-201ENST00000340648 GPR6P46095 362 aaPredicted RBP12.46□□□□□ -0.41
RRP1B-201ENST00000340648 TFPI2P48307 235 aa12.46□□□□□ -0.41
RRP1B-201ENST00000340648 ZNF497Q6ZNH5 498 aa12.46□□□□□ -0.41
RRP1B-201ENST00000340648 C1orf147Q96MC9 270 aaPredicted RBP12.46□□□□□ -0.41
RRP1B-201ENST00000340648 CDC42EP3Q9UKI2 254 aa12.46□□□□□ -0.41
RRP1B-201ENST00000340648 CACNA1EQ15878 2313 aa12.46□□□□□ -0.41
RRP1B-201ENST00000340648 PPIAL4EA0A075B759 164 aa12.46□□□□□ -0.42
RRP1B-201ENST00000340648 WIPF3A6NGB9 483 aa12.46□□□□□ -0.42
RRP1B-201ENST00000340648 PPIAL4DF5H284 164 aa12.46□□□□□ -0.42
RRP1B-201ENST00000340648 PPIAL4FP0DN26 164 aa12.46□□□□□ -0.42
RRP1B-201ENST00000340648 TMEM70Q9BUB7 260 aa12.46□□□□□ -0.42
RRP1B-201ENST00000340648 PPIAL4AQ9Y536 164 aa12.46□□□□□ -0.42
RRP1B-201ENST00000340648 PLXNA4Q9HCM2 1894 aa12.46□□□□□ -0.42
RRP1B-201ENST00000340648 IGKV1-5P01602 117 aa12.46□□□□□ -0.42
RRP1B-201ENST00000340648 FAM90A2PQ658T7 463 aa12.46□□□□□ -0.42
RRP1B-201ENST00000340648 ERASQ7Z444 233 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms