RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 RABL2AQ9UBK7 228 aaPredicted RBP11.86□□□□□ -0.51
VAPA-201ENST00000340541 RSL24D1Q9UHA3 163 aaKnown RBP11.86□□□□□ -0.51
VAPA-201ENST00000340541 RABL2BQ9UNT1 228 aa11.86□□□□□ -0.51
VAPA-201ENST00000340541 TENM3Q9P273 2699 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 TRBV9A0A0B4J1U6 114 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 CCDC160A6NGH7 325 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 LINC01619G3V211 115 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 ZNF701M0R085 212 aaPredicted RBP11.85□□□□□ -0.51
VAPA-201ENST00000340541 MPPED1O15442 326 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 GSTZ1O43708 216 aaPredicted RBP11.85□□□□□ -0.51
VAPA-201ENST00000340541 RAB3DO95716 219 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 PRH1P02810 166 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 IFNA6P05013 189 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 RPA2P15927 270 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 SLURP1P55000 103 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 STEAP1BQ6NZ63 245 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 TBC1D26Q86UD7 250 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 DCUN1D4Q92564 292 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 WWC2-AS2Q96NR7 200 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 HRASLSQ9HDD0 168 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 SLC2A9Q9NRM0 540 aa11.85□□□□□ -0.51
VAPA-201ENST00000340541 FAM212BQ9NTI7 297 aaPredicted RBP11.85□□□□□ -0.51
VAPA-201ENST00000340541 A0A0G2JLM5 398 aa11.84□□□□□ -0.51
VAPA-201ENST00000340541 MARCH11A6NNE9 402 aa11.84□□□□□ -0.51
VAPA-201ENST00000340541 HSPB1P04792 205 aaKnown RBP11.84□□□□□ -0.51
VAPA-201ENST00000340541 FGF2P09038 288 aa11.84□□□□□ -0.51
VAPA-201ENST00000340541 NHLRC4P0CG21 123 aaPredicted RBP11.84□□□□□ -0.51
VAPA-201ENST00000340541 AREGP15514 252 aa11.84□□□□□ -0.51
VAPA-201ENST00000340541 OR2B8PP59922 312 aa11.84□□□□□ -0.51
VAPA-201ENST00000340541 RND3P61587 244 aa11.84□□□□□ -0.51
VAPA-201ENST00000340541 FAAP20Q6NZ36 180 aa11.84□□□□□ -0.51
VAPA-201ENST00000340541 C19orf35Q6ZS72 473 aa11.84□□□□□ -0.51
VAPA-201ENST00000340541 CADM3Q8N126 398 aa11.84□□□□□ -0.51
VAPA-201ENST00000340541 DMBX1Q8NFW5 382 aa11.84□□□□□ -0.51
VAPA-201ENST00000340541 TERB2Q8NHR7 220 aa11.84□□□□□ -0.51
VAPA-201ENST00000340541 DLX4Q92988 240 aaPredicted RBP11.84□□□□□ -0.51
VAPA-201ENST00000340541 FYTTD1Q96QD9 318 aaKnown RBP11.84□□□□□ -0.51
VAPA-201ENST00000340541 C13orf42A0A1B0GVH6 325 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 NPIPB5A8MRT5 1133 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 SEC14L6B5MCN3 397 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 KRASP01116 189 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 IGKV1-39P01597 117 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 IGKV1D-39P04432 117 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 CRYGCP07315 174 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 PI3P19957 117 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 G6PCP35575 357 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 RHOGP84095 191 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 KLK9Q2XQG4 91 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 C11orf87Q6NUJ2 197 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 ZNF343Q6P1L6 599 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 ZNF486Q96H40 463 aaPredicted RBP11.83□□□□□ -0.52
VAPA-201ENST00000340541 USMG5Q96IX5 58 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 AKIP1Q9NQ31 210 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 KLK9Q9UKQ9 250 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 ZNF257Q9Y2Q1 563 aa11.83□□□□□ -0.52
VAPA-201ENST00000340541 IGLC7A0M8Q6 106 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 FABP12A6NFH5 140 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 TRBV12-3P01733 135 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 CTRB1P17538 263 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 PTBP1P26599 531 aaKnown RBP eCLIP11.82□□□□□ -0.523e-7■■■□□ 15.2
VAPA-201ENST00000340541 PSMB6P28072 239 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 PPP5CP53041 499 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 ERVK-16P61578 105 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 MEF2DQ14814 521 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 C9orf66Q5T8R8 295 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 CTRB2Q6GPI1 263 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 SLC25A42Q86VD7 318 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 OR4C16Q8NGL9 310 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 FANCD2OSQ96PS1 177 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 V9GYH0 126 aa11.82□□□□□ -0.52
VAPA-201ENST00000340541 ANKRD20A5PA0PJZ0 165 aa11.81□□□□□ -0.52
VAPA-201ENST00000340541 ANKRD34BA5PLL1 514 aa11.81□□□□□ -0.52
VAPA-201ENST00000340541 FAM223BA6NKX1 122 aa11.81□□□□□ -0.52
VAPA-201ENST00000340541 OVOL1O14753 267 aa11.81□□□□□ -0.52
VAPA-201ENST00000340541 PGAM2P15259 253 aa11.81□□□□□ -0.52
VAPA-201ENST00000340541 S100GP29377 79 aa11.81□□□□□ -0.52
VAPA-201ENST00000340541 PIGPP57054 158 aa11.81□□□□□ -0.52
VAPA-201ENST00000340541 SCGB2B2Q4G0G5 96 aa11.81□□□□□ -0.52
VAPA-201ENST00000340541 FAM223AQ8IWN6 122 aa11.81□□□□□ -0.52
VAPA-201ENST00000340541 NECAP1Q8NC96 275 aa11.81□□□□□ -0.52
VAPA-201ENST00000340541 OR13C8Q8NGS7 320 aa11.81□□□□□ -0.52
VAPA-201ENST00000340541 MARCH1Q8TCQ1 289 aa11.81□□□□□ -0.52
VAPA-201ENST00000340541 SEC22AQ96IW7 307 aa11.81□□□□□ -0.52
VAPA-201ENST00000340541 RANGRFQ9HD47 186 aaPredicted RBP11.81□□□□□ -0.52
VAPA-201ENST00000340541 TEX50A0A1B0GTY4 177 aa11.8□□□□□ -0.52
VAPA-201ENST00000340541 H0Y980 276 aa11.8□□□□□ -0.52
VAPA-201ENST00000340541 OR2J3O76001 311 aa11.8□□□□□ -0.52
VAPA-201ENST00000340541 REG1AP05451 166 aa11.8□□□□□ -0.52
VAPA-201ENST00000340541 AKAIN1P0CW23 69 aa11.8□□□□□ -0.52
VAPA-201ENST00000340541 CCDC190Q86UF4 302 aa11.8□□□□□ -0.52
VAPA-201ENST00000340541 OR10W1Q8NGF6 305 aa11.8□□□□□ -0.52
VAPA-201ENST00000340541 TP53RKQ96S44 253 aa11.8□□□□□ -0.52
VAPA-201ENST00000340541 SRSF8Q9BRL6 282 aaKnown RBP11.8□□□□□ -0.52
VAPA-201ENST00000340541 QTRT1Q9BXR0 403 aaKnown RBP11.8□□□□□ -0.52
VAPA-201ENST00000340541 COMMD5Q9GZQ3 224 aa11.8□□□□□ -0.52
VAPA-201ENST00000340541 PEF1Q9UBV8 284 aaKnown RBP11.8□□□□□ -0.52
VAPA-201ENST00000340541 NSG2Q9Y328 171 aa11.8□□□□□ -0.52
VAPA-201ENST00000340541 DMRT1Q9Y5R6 373 aa11.8□□□□□ -0.52
VAPA-201ENST00000340541 IGLV11-55A0A075B6I3 123 aa11.79□□□□□ -0.52
VAPA-201ENST00000340541 DPPA5A6NC42 116 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms