RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 CT45A6P0DMU7 189 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 CT45A5P0DMU8 189 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 CT45A7P0DMV0 189 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 RPL35P42766 123 aaKnown RBP8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 THBS3P49746 956 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 MARVELD3Q96A59 401 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 CIB3Q96Q77 187 aaPredicted RBP8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 KPTNQ9Y664 436 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 TRIM77I1YAP6 450 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 F2RL2O00254 374 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 CA2P00918 260 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 IGKV1D-33P01593 117 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 IGKV1-33P01594 117 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 SOD3P08294 240 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 MDKP21741 143 aaPredicted RBP8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 NPY1RP25929 384 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 CD1BP29016 333 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 KLRD1Q13241 179 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 ADIRFQ15847 76 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 LINC00312Q9Y6C7 94 aa8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 SETD2Q9BYW2 2564 aaPredicted RBP8.33□□□□□ -1.08
RBFOX1-202ENST00000340209 HRASP01112 189 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 PNKDQ8N490 385 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 FCN3O75636 299 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 CFHR2P36980 270 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 LGALS4P56470 323 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 LRRC75BQ2VPJ9 315 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 ZNF429Q86V71 674 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 OR10A7Q8NGE5 316 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 FAM216AQ8WUB2 273 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 FLYWCH2Q96CP2 140 aaKnown RBP8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 TPSG1Q9NRR2 321 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 TET2Q6N021 2002 aaPredicted RBP8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 SONP18583 2426 aaKnown RBP8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 PPIAL4CA0A0B4J2A2 164 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 C15orf62A8K5M9 175 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 PPIAL4GP0DN37 164 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 MMP9P14780 707 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 SPSB3Q6PJ21 355 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 ST6GALNAC3Q8NDV1 305 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 SLC24A4Q8NFF2 622 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 NPCDR1Q9BY65 106 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 CREBBPQ92793 2442 aa8.32□□□□□ -1.08
RBFOX1-202ENST00000340209 SCAF4O95104 1147 aaKnown RBP8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 PRB1P04280 392 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 CNTFRP26992 372 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 LOXP28300 417 aaPredicted RBP8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 RELBQ01201 579 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 ZNF726P1Q15940 193 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 RPP25LQ8N5L8 163 aaKnown RBP8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 DIRC2Q96SL1 478 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 NIPSNAP3BQ9BS92 247 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 NAV2Q8IVL1 2488 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 IGHV3OR16-10A0A075B7F0 116 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 PAGE4O60829 102 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 HBE1P02100 147 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 SPCS3P61009 180 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 TNXAQ16473 311 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 ZNF343Q6P1L6 599 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 TMEM14EPQ6UXP3 125 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 RAB24Q969Q5 203 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 PCGF1Q9BSM1 259 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 ARV1Q9H2C2 271 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 S4R3C0 116 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 H3BQ15 152 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 CD5P06127 495 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 GNB2P62879 340 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 TMEM41BQ5BJD5 291 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 LFNGQ8NES3 379 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 RAB1BQ9H0U4 201 aa8.31□□□□□ -1.08
RBFOX1-202ENST00000340209 RPEQ96AT9 228 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 MISP3Q96FF7 219 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 RITA1Q96K30 269 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 JKAMPQ9P055 326 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 USP24Q9UPU5 2620 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 NUDT19A8MXV4 375 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 OPRK1P41145 380 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 CDC34P49427 236 aaPredicted RBP8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 FAM222BQ8WU58 562 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 TIMD4Q96H15 378 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 C17orf112F2Z3M2 114 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 RPS10P46783 165 aaKnown RBP8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 RPP30P78346 268 aaKnown RBP8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 LCN2P80188 198 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 ICAM4Q14773 271 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 RAB39BQ96DA2 213 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 SMIM7Q9BQ49 75 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 INSIG2Q9Y5U4 225 aa8.3□□□□□ -1.08
RBFOX1-202ENST00000340209 FAM90A26D6RGX4 464 aa8.29□□□□□ -1.08
RBFOX1-202ENST00000340209 IGFBP2P18065 325 aa8.29□□□□□ -1.08
RBFOX1-202ENST00000340209 HSPE1P61604 102 aaKnown RBP8.29□□□□□ -1.08
RBFOX1-202ENST00000340209 TEX36Q5VZQ5 186 aa8.29□□□□□ -1.08
RBFOX1-202ENST00000340209 SLC25A48Q6ZT89 311 aaKnown RBP8.29□□□□□ -1.08
RBFOX1-202ENST00000340209 OR8B3Q8NGG8 313 aa8.29□□□□□ -1.08
RBFOX1-202ENST00000340209 OR8B2Q96RD0 313 aa8.29□□□□□ -1.08
RBFOX1-202ENST00000340209 ACTR3CQ9C0K3 210 aaPredicted RBP8.29□□□□□ -1.08
RBFOX1-202ENST00000340209 KIAA1456Q9P272 454 aa8.29□□□□□ -1.08
RBFOX1-202ENST00000340209 C15orf61A6NNL5 157 aa8.29□□□□□ -1.08
RBFOX1-202ENST00000340209 OR2C1O95371 312 aa8.29□□□□□ -1.08
RBFOX1-202ENST00000340209 CNIH1O95406 144 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms