RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 PDLIM3Q53GG5 364 aaPredicted RBP7.8□□□□□ -1.16
NECAP1-201ENST00000339754 FAM53AQ6NSI3 398 aaPredicted RBP7.8□□□□□ -1.16
NECAP1-201ENST00000339754 FAM71F2Q6NXP2 309 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 MOB1BQ7L9L4 216 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 H2BFWTQ7Z2G1 175 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 SPACA3Q8IXA5 215 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 ZBTB34Q8NCN2 500 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 MS4A5Q9H3V2 200 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 GP6Q9HCN6 339 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 IL19Q9UHD0 177 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 MRPS17Q9Y2R5 130 aaKnown RBP7.8□□□□□ -1.16
NECAP1-201ENST00000339754 TMEM265A0A087WTH1 108 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 MUC21A0A0G2JKD1 596 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 MUC21A0A140T8X8 626 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 PRSS46E5RG02 174 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 LMO7DNF2Z398 122 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 G3V3Y1 287 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 ISLRO14498 428 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 TOX4O94842 621 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 CCNOP22674 350 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 CA6P23280 308 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 ZXDAP98168 799 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 MUC21Q5SSG8 566 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 MRPL21Q7Z2W9 205 aaKnown RBP7.8□□□□□ -1.16
NECAP1-201ENST00000339754 LHFPL4Q7Z7J7 247 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 SVIPQ8NHG7 77 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 POM121L2Q96KW2 1035 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 MEGF9Q9H1U4 602 aa7.8□□□□□ -1.16
NECAP1-201ENST00000339754 TNRC6BQ9UPQ9 1833 aaKnown RBP7.8□□□□□ -1.16
NECAP1-201ENST00000339754 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 J3QR06 171 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 M0R2Z0 102 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 CORTO00230 105 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 HSBP1O75506 76 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 RBMXL2O75526 392 aaKnown RBP7.79□□□□□ -1.16
NECAP1-201ENST00000339754 IGLV2-8P01709 118 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 CCL3P10147 92 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 MYF5P13349 255 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 GATA2P23769 480 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-201ENST00000339754 NPY1RP25929 384 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 CA7P43166 264 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 DUSP3P51452 185 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-201ENST00000339754 TMPRSS3P57727 454 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 KLF5Q13887 457 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-201ENST00000339754 EFNB3Q15768 340 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 ZNF808Q8N4W9 903 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-201ENST00000339754 SARAFQ96BY9 339 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 PRRG4Q9BZD6 226 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 TNFRSF19Q9NS68 423 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 ADAMTS20P59510 1910 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 TRAV8-6A0A0B4J262 113 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 IZUMO1RA6ND01 250 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 SAP30O75446 220 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 NGFP01138 241 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 CGAP01215 116 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 USF1P22415 310 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-201ENST00000339754 CRYBB3P26998 211 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 OTX2P32243 289 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 RIPPLY3P57055 190 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 LINC00205P59089 165 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 GDF5OSQ5U4N7 250 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 OR52L2PQ8NGH6 319 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 ST20Q9HBF5 79 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 CABIN1Q9Y6J0 2220 aa7.79□□□□□ -1.16
NECAP1-201ENST00000339754 DNPH1O43598 174 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 DUX1O43812 170 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 CD5LO43866 347 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 SS18L1O75177 396 aaPredicted RBP7.78□□□□□ -1.16
NECAP1-201ENST00000339754 OR2H2O95918 312 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 B3GALT5-AS1P59052 145 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 SSMEM1Q8WWF3 244 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 FAM168AQ92567 244 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 CDX2Q99626 313 aaPredicted RBP7.78□□□□□ -1.16
NECAP1-201ENST00000339754 LSM4Q9Y4Z0 139 aaKnown RBP7.78□□□□□ -1.16
NECAP1-201ENST00000339754 SDK2Q58EX2 2172 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 KMT2EQ8IZD2 1858 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 C5orf49A4QMS7 147 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 CRXO43186 299 aaPredicted RBP7.78□□□□□ -1.16
NECAP1-201ENST00000339754 CELA2AP08217 269 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 OR9G9P0C7N8 305 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 IGLC1P0CG04 106 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 VWA1Q6PCB0 445 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 FAM214BQ7L5A3 538 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 GGNQ86UU5 652 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 WIPF2Q8TF74 440 aaPredicted RBP7.78□□□□□ -1.16
NECAP1-201ENST00000339754 URB1-AS1Q96HZ7 61 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 KCNIP1Q9NZI2 227 aa7.78□□□□□ -1.16
NECAP1-201ENST00000339754 OR4C46A6NHA9 309 aa7.77□□□□□ -1.16
NECAP1-201ENST00000339754 LINC00473A8K010 186 aa7.77□□□□□ -1.16
NECAP1-201ENST00000339754 M0R1X1 148 aa7.77□□□□□ -1.16
NECAP1-201ENST00000339754 MT-CO2P00403 227 aa7.77□□□□□ -1.16
NECAP1-201ENST00000339754 GNG3P63215 75 aa7.77□□□□□ -1.16
NECAP1-201ENST00000339754 CATR1Q13166 79 aa7.77□□□□□ -1.16
NECAP1-201ENST00000339754 TIGITQ495A1 244 aa7.77□□□□□ -1.16
NECAP1-201ENST00000339754 FAM120AOSQ5T036 256 aa7.77□□□□□ -1.16
NECAP1-201ENST00000339754 C12orf54Q6X4T0 127 aa7.77□□□□□ -1.16
NECAP1-201ENST00000339754 TMEM45BQ96B21 275 aa7.77□□□□□ -1.16
NECAP1-201ENST00000339754 TMEM70Q9BUB7 260 aa7.77□□□□□ -1.16
NECAP1-201ENST00000339754 ZNF430Q9H8G1 570 aaPredicted RBP7.77□□□□□ -1.16
NECAP1-201ENST00000339754 ZNF331Q9NQX6 463 aaPredicted RBP7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms