RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 MAST4O15021 2626 aa11.6□□□□□ -0.55
NIPAL3-202ENST00000339255 MDFIC2A0A1B0GVS7 189 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 A6NDX4 124 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 SCGB1D2O95969 90 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 RLN2P04090 185 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 S100A10P60903 97 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 SPCS3P61009 180 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 RAB32Q13637 225 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 LRRC37A5PQ49AS3 106 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 CXorf66Q5JRM2 361 aaPredicted RBP11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 RBMS3Q6XE24 437 aaKnown RBP11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 THAP6Q8TBB0 222 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 RBMXL1Q96E39 390 aaKnown RBP11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 SLC25A33Q9BSK2 321 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 FBXL15Q9H469 300 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 NSG2Q9Y328 171 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 OR51B2Q9Y5P1 312 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 TRAV3A0A0B4J244 114 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 IFNA17P01571 189 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 C1QBP02746 253 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 SRD5A1P18405 259 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 PVALBP20472 110 aaPredicted RBP11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 HSPE1P61604 102 aaKnown RBP11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 ZFP69Q49AA0 526 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 FBLN7Q53RD9 439 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 MRPL41Q8IXM3 137 aaKnown RBP11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 TMEM86BQ8N661 226 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 OR1L8Q8NGR8 309 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 CIB3Q96Q77 187 aaPredicted RBP11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 RAB40CQ96S21 281 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 QTRT1Q9BXR0 403 aaKnown RBP11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 TPSG1Q9NRR2 321 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 VPREB3Q9UKI3 123 aa11.59□□□□□ -0.55
NIPAL3-202ENST00000339255 K7EPK0 472 aa11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 SYNGR2O43760 224 aa11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 DEDDO75618 318 aa11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 IGHV4-59P01825 116 aa11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 HLA-DRB1P01911 266 aa11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 COMPP49747 757 aaPredicted RBP11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 CD300CQ08708 224 aa11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 PRSS54Q6PEW0 395 aa11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 Q8N9W7 124 aa11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 WDR89Q96FK6 387 aaPredicted RBP11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 ZNF48Q96MX3 618 aaPredicted RBP11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 CLCC1Q96S66 551 aa11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 RASL11BQ9BPW5 248 aa11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 RCL1Q9Y2P8 373 aaKnown RBP11.58□□□□□ -0.56
NIPAL3-202ENST00000339255 PRCDQ00LT1 54 aa11.57□□□□□ -0.56
NIPAL3-202ENST00000339255 C11orf87Q6NUJ2 197 aa11.57□□□□□ -0.56
NIPAL3-202ENST00000339255 TMEM219Q86XT9 240 aa11.57□□□□□ -0.56
NIPAL3-202ENST00000339255 C5orf56Q8N8D9 126 aa11.57□□□□□ -0.56
NIPAL3-202ENST00000339255 MBD2Q9UBB5 411 aa11.57□□□□□ -0.56
NIPAL3-202ENST00000339255 LSM5Q9Y4Y9 91 aaKnown RBP11.57□□□□□ -0.56
NIPAL3-202ENST00000339255 E5RGE8 158 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 G3V3Q6 166 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 SSSCA1O60232 199 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 SLC25A4P12235 298 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 LYL1P12980 280 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 TAS2R30P59541 319 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 PJVKQ0ZLH3 352 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 TNXAQ16473 311 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 MRGPRG-AS1Q2M3A8 158 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 ZNF562Q6V9R5 426 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 HSD17B13Q7Z5P4 300 aaPredicted RBP11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 SIGLECL1Q8N7X8 197 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 HYLS1Q96M11 299 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 SRSF8Q9BRL6 282 aaKnown RBP11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 MAGT1Q9H0U3 335 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 WSB1Q9Y6I7 421 aa11.56□□□□□ -0.56
NIPAL3-202ENST00000339255 TRAV14DV4A0A0A6YYC5 116 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 TEX50A0A1B0GTY4 177 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 CEBPZOSA8MTT3 80 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 L7N2F9 121 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 GPR137BO60478 399 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 NXPH3O95157 252 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 CNIH1O95406 144 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 CA2P00918 260 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 RPL27AP46776 148 aaKnown RBP11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 POLR2GP62487 172 aaKnown RBP eCLIP11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 VAMP2P63027 116 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 LY6EQ16553 131 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 DTD1Q8TEA8 209 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 HIPK2Q9H2X6 1198 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 RBKSQ9H477 322 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 PLEKHA3Q9HB20 300 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 ENY2Q9NPA8 101 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 NDUFA4L2Q9NRX3 87 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 FXYD6-FXYD2A0A087WZ82 144 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 A0A1W2PN81 502 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 INS-IGF2F8WCM5 200 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 SMLR1H3BR10 107 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 HOXA3O43365 443 aaPredicted RBP11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 CHST1O43916 411 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 HNRNPCP07910 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 CHRNA7P36544 502 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 HOXA1P49639 335 aaPredicted RBP11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 GNB1P62873 340 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 Q5BKY6 102 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 TMEM65Q6PI78 240 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 SMIM8Q96KF7 97 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms