RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ARL2-SNX15V9GYD0 113 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 IGFBP2P18065 325 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 ETFRF1Q6IPR1 90 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 M0R1B8 84 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 MAS1LP35410 378 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 GPR6P46095 362 aaPredicted RBP11.81□□□□□ -0.52
PCDH8-201ENST00000338862 PTTG1IPP53801 180 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 GFRA1P56159 465 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 SOX8P57073 446 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 RHOBP62745 196 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 MLANAQ16655 118 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 SPATA45Q537H7 98 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 MOGAT3Q86VF5 341 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 TGIF2LYQ8IUE0 185 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 CXorf1O96002 111 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 NPY1RP25929 384 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 RNPS1Q15287 305 aaKnown RBP11.81□□□□□ -0.52
PCDH8-201ENST00000338862 KRTCAP3Q53RY4 240 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 ACTL10Q5JWF8 245 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 MIR17HGQ75NE6 70 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 TMEM106BQ9NUM4 274 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 TMEM140Q9NV12 185 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 HSPB7Q9UBY9 170 aa11.81□□□□□ -0.52
PCDH8-201ENST00000338862 IL18BPO95998 194 aa11.8□□□□□ -0.52
PCDH8-201ENST00000338862 CSN3P07498 182 aa11.8□□□□□ -0.52
PCDH8-201ENST00000338862 STPG3Q8N7X2 389 aa11.8□□□□□ -0.52
PCDH8-201ENST00000338862 TBL2Q9Y4P3 447 aaKnown RBP11.8□□□□□ -0.52
PCDH8-201ENST00000338862 PRDX2P32119 198 aa11.8□□□□□ -0.52
PCDH8-201ENST00000338862 PCP4P48539 62 aa11.8□□□□□ -0.52
PCDH8-201ENST00000338862 ZNF137PP52743 207 aa11.8□□□□□ -0.52
PCDH8-201ENST00000338862 PRB3Q04118 309 aaPredicted RBP11.8□□□□□ -0.52
PCDH8-201ENST00000338862 CENPWQ5EE01 88 aa11.8□□□□□ -0.52
PCDH8-201ENST00000338862 LCN12Q6JVE5 192 aa11.8□□□□□ -0.52
PCDH8-201ENST00000338862 PPP1R35Q8TAP8 253 aa11.8□□□□□ -0.52
PCDH8-201ENST00000338862 H1FXQ92522 213 aaKnown RBP11.8□□□□□ -0.52
PCDH8-201ENST00000338862 LRP4O75096 1905 aa11.8□□□□□ -0.52
PCDH8-201ENST00000338862 VAMP3Q15836 100 aa11.8□□□□□ -0.52
PCDH8-201ENST00000338862 ZNF718Q3SXZ3 478 aa11.8□□□□□ -0.52
PCDH8-201ENST00000338862 GCHFRP30047 84 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 MFAP2P55001 183 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 FOXF2Q12947 444 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 TEPPQ6URK8 271 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 OR2D3Q8NGH3 330 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 RNF138Q8WVD3 245 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 PKIBQ9C010 78 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 SH2D2AQ9NP31 389 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 ZNRD1Q9P1U0 126 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 KLF13Q9Y2Y9 288 aaPredicted RBP11.79□□□□□ -0.52
PCDH8-201ENST00000338862 A0A1W2PRD5 423 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 A0A1W2PRF3 423 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 A0A1W2PRM7 423 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 SMPD2O60906 423 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 ZNF766Q5HY98 468 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 OR5B3Q8NH48 314 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 DIRC2Q96SL1 478 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 TCF19Q9Y242 345 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 YTHDF2Q9Y5A9 579 aaKnown RBP11.79□□□□□ -0.52
PCDH8-201ENST00000338862 ASPMQ8IZT6 3477 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 BOD1L1Q8NFC6 3051 aa11.79□□□□□ -0.52
PCDH8-201ENST00000338862 IL6RP08887 468 aaPredicted RBP11.78□□□□□ -0.52
PCDH8-201ENST00000338862 USF1P22415 310 aaPredicted RBP11.78□□□□□ -0.52
PCDH8-201ENST00000338862 RANP62826 216 aaKnown RBP11.78□□□□□ -0.52
PCDH8-201ENST00000338862 COLCA1Q6ZS62 124 aa11.78□□□□□ -0.52
PCDH8-201ENST00000338862 SLC24A4Q8NFF2 622 aa11.78□□□□□ -0.52
PCDH8-201ENST00000338862 TMEM208Q9BTX3 173 aa11.78□□□□□ -0.52
PCDH8-201ENST00000338862 SSBP4Q9BWG4 385 aaPredicted RBP11.78□□□□□ -0.52
PCDH8-201ENST00000338862 IGLV2-14P01704 120 aa11.78□□□□□ -0.52
PCDH8-201ENST00000338862 SP1P08047 785 aa11.78□□□□□ -0.52
PCDH8-201ENST00000338862 TREML4Q6UXN2 200 aa11.78□□□□□ -0.52
PCDH8-201ENST00000338862 RBMXL3Q8N7X1 1067 aaKnown RBP11.78□□□□□ -0.52
PCDH8-201ENST00000338862 LINC00479Q96M42 142 aa11.78□□□□□ -0.52
PCDH8-201ENST00000338862 ELOVL5Q9NYP7 299 aa11.78□□□□□ -0.52
PCDH8-201ENST00000338862 RAB29O14966 203 aa11.78□□□□□ -0.52
PCDH8-201ENST00000338862 ORM2P19652 201 aa11.78□□□□□ -0.52
PCDH8-201ENST00000338862 FOXA3P55318 350 aaPredicted RBP11.78□□□□□ -0.52
PCDH8-201ENST00000338862 UBE2L3P68036 154 aaKnown RBP11.78□□□□□ -0.52
PCDH8-201ENST00000338862 NPVFQ9HCQ7 196 aa11.78□□□□□ -0.52
PCDH8-201ENST00000338862 C15orf62A8K5M9 175 aa11.77□□□□□ -0.52
PCDH8-201ENST00000338862 RAB4AP20338 218 aa11.77□□□□□ -0.52
PCDH8-201ENST00000338862 LINC00596Q86U02 117 aa11.77□□□□□ -0.52
PCDH8-201ENST00000338862 ZFHX2Q9C0A1 2572 aaPredicted RBP11.77□□□□□ -0.52
PCDH8-201ENST00000338862 FAM90A26D6RGX4 464 aa11.77□□□□□ -0.53
PCDH8-201ENST00000338862 CA2P00918 260 aa11.77□□□□□ -0.53
PCDH8-201ENST00000338862 Q6ZWC4 215 aa11.77□□□□□ -0.53
PCDH8-201ENST00000338862 KCNIP2Q9NS61 270 aa11.77□□□□□ -0.53
PCDH8-201ENST00000338862 ZNF355PQ9NSJ1 428 aa11.77□□□□□ -0.53
PCDH8-201ENST00000338862 PCNX2A6NKB5 2137 aa11.77□□□□□ -0.53
PCDH8-201ENST00000338862 GGCTO75223 188 aaKnown RBP11.77□□□□□ -0.53
PCDH8-201ENST00000338862 MRPS11P82912 194 aaKnown RBP11.77□□□□□ -0.53
PCDH8-201ENST00000338862 VWA1Q6PCB0 445 aa11.77□□□□□ -0.53
PCDH8-201ENST00000338862 COQ2Q96H96 371 aa11.77□□□□□ -0.53
PCDH8-201ENST00000338862 TRBV20OR9-2A0A075B6H5 130 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 LBHQ53QV2 105 aaPredicted RBP11.76□□□□□ -0.53
PCDH8-201ENST00000338862 OPN3Q9H1Y3 402 aaPredicted RBP11.76□□□□□ -0.53
PCDH8-201ENST00000338862 DNAJC4Q9NNZ3 241 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 TANC2Q9HCD6 1990 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 C20orf202A1L168 122 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 CBY3A6NI87 242 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 J3QR06 171 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 VENTXO95231 258 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms