RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 NDUFB4O95168 129 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 IGHV1-46P01743 117 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 FABP4P15090 132 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 CCL3L1P16619 93 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 LGALS7P47929 136 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 CD177Q8N6Q3 437 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 HILPDAQ9Y5L2 63 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 LINC00312Q9Y6C7 94 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 ATG2AQ2TAZ0 1938 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 TMEM11P17152 192 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 RPL30P62888 115 aaKnown RBP5.26□□□□□ -1.57
PRKDC-202ENST00000338368 RPL11P62913 178 aaKnown RBP5.26□□□□□ -1.57
PRKDC-202ENST00000338368 SPNS3Q6ZMD2 512 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 TMPRSS5Q9H3S3 457 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 AURKAIP1Q9NWT8 199 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-202ENST00000338368 MLNRO43193 412 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 HERPUD1Q15011 391 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 ZNF506Q5JVG8 444 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 ATRAIDQ6UW56 229 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 OR10D4PQ8NGN7 298 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 OR4C13Q8NGP0 309 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 OR1L6Q8NGR2 347 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 RASL11BQ9BPW5 248 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 TMEM204Q9BSN7 226 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 FAM208BQ5VWN6 2430 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 C20orf202A1L168 122 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 Q8WTZ3 238 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 SORL1Q92673 2214 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 A0A0G2JRQ6 117 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 GOSR1O95249 250 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 C20orf204Q6ZNR8 217 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 PIP4P1Q86T03 277 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 PDPNQ86YL7 162 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-202ENST00000338368 OR1B1Q8NGR6 318 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 COQ2Q96H96 371 aa5.26□□□□□ -1.57
PRKDC-202ENST00000338368 CORTO00230 105 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 HSBP1O75506 76 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 WT1P19544 449 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-202ENST00000338368 RND2P52198 227 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 SELENOTP62341 195 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 PERPQ96FX8 193 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 CHEK1O14757 476 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 PHOX2AO14813 284 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 RAMP3O60896 148 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 PQLC2Q6ZP29 291 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 SLC16A13Q7RTY0 426 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 NAT8BQ9UHF3 227 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 SRP19P09132 144 aaKnown RBP5.25□□□□□ -1.57
PRKDC-202ENST00000338368 DUTP33316 252 aaKnown RBP5.25□□□□□ -1.57
PRKDC-202ENST00000338368 OR4A47Q6IF82 309 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 LIME1Q9H400 295 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 NCOA6Q14686 2063 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-202ENST00000338368 LOC102723971A0A1B0GUV8 181 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 LIPFP07098 398 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 TCL1AP56279 114 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 RPRMLQ8N4K4 120 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 OR5R1Q8NH85 324 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 CLEC7AQ9BXN2 247 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 IGKV1-6A0A0C4DH72 117 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 CA2P00918 260 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 SRSF3P84103 164 aaKnown RBP5.25□□□□□ -1.57
PRKDC-202ENST00000338368 IQCJQ1A5X6 159 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 RCC1LQ96I51 464 aaKnown RBP5.25□□□□□ -1.57
PRKDC-202ENST00000338368 FCN1O00602 326 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 SELLP14151 372 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 OR5AU1Q8NGC0 362 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 NPIPB3Q92617 1050 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 WFDC1Q9HC57 220 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 ANOS1P23352 680 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 Q6P435 159 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 Q6ZSR3 168 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 HSPB7Q9UBY9 170 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 MIOXQ9UGB7 285 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 TNCP24821 2201 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 ACAA1P09110 424 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-202ENST00000338368 HTR1DP28221 377 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 HCP5Q6MZN7 132 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 HIST1H2BAQ96A08 127 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 RBFOX2O43251 390 aaKnown RBP eCLIP5.25□□□□□ -1.572e-7■■■■□ 25.6
PRKDC-202ENST00000338368 IGKV1-5P01602 117 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 C8orf88P0DMB2 117 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 C19orf35Q6ZS72 473 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 RNASE6Q93091 150 aaKnown RBP5.25□□□□□ -1.57
PRKDC-202ENST00000338368 TMUB1Q9BVT8 246 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 RAXQ9Y2V3 346 aa5.25□□□□□ -1.57
PRKDC-202ENST00000338368 TBR1Q16650 682 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 IGFL3Q6UXB1 125 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 FAM169BQ8N8A8 192 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 GATAD1Q8WUU5 269 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 TNFRSF19Q9NS68 423 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 A0A1W2PNU3 283 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-202ENST00000338368 ZNF785A8K8V0 405 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 CRIM1Q9NZV1 1036 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 LINC00869P0C866 280 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 BATFQ16520 125 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 RPEL1Q2QD12 228 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 Q6ZR03 302 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 PNKDQ8N490 385 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 FAM103A1Q9BTL3 118 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms