RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 TSNAXQ99598 290 aaKnown RBP11.8□□□□□ -0.52
CBX3-201ENST00000337620 FBXL17Q9UF56 701 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 CACFD1Q9UGQ2 172 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 PAIP2BQ9ULR5 123 aaKnown RBP11.8□□□□□ -0.52
CBX3-201ENST00000337620 TCF19Q9Y242 345 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 U3KQ87 197 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 PRRC2AP48634 2157 aaKnown RBP11.8□□□□□ -0.52
CBX3-201ENST00000337620 CFDP00746 253 aaPredicted RBP11.8□□□□□ -0.52
CBX3-201ENST00000337620 SNRNP70P08621 437 aaKnown RBP11.8□□□□□ -0.52
CBX3-201ENST00000337620 IGHV4-31P0DP07 118 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 IGHV4-38-2P0DP08 117 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 PSG5Q15238 335 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 TMEM217Q8N7C4 229 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 OR4A5Q8NH83 315 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 TMEM167AQ8TBQ9 72 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 CIB3Q96Q77 187 aaPredicted RBP11.8□□□□□ -0.52
CBX3-201ENST00000337620 CLCC1Q96S66 551 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 TPSG1Q9NRR2 321 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 FKBP11Q9NYL4 201 aa11.8□□□□□ -0.52
CBX3-201ENST00000337620 TET2Q6N021 2002 aaPredicted RBP11.79□□□□□ -0.52
CBX3-201ENST00000337620 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.79□□□□□ -0.522e-60■■■■□ 26
CBX3-201ENST00000337620 TEX50A0A1B0GTY4 177 aa11.79□□□□□ -0.52
CBX3-201ENST00000337620 MOSP00540 346 aa11.79□□□□□ -0.52
CBX3-201ENST00000337620 AVPP01185 164 aa11.79□□□□□ -0.52
CBX3-201ENST00000337620 HOXA1P49639 335 aaPredicted RBP11.79□□□□□ -0.52
CBX3-201ENST00000337620 STX12Q86Y82 276 aa11.79□□□□□ -0.52
CBX3-201ENST00000337620 RNF5Q99942 180 aa11.79□□□□□ -0.52
CBX3-201ENST00000337620 COMMD5Q9GZQ3 224 aa11.79□□□□□ -0.52
CBX3-201ENST00000337620 HIPK2Q9H2X6 1198 aa11.79□□□□□ -0.52
CBX3-201ENST00000337620 ZNF430Q9H8G1 570 aaPredicted RBP11.79□□□□□ -0.52
CBX3-201ENST00000337620 HEYLQ9NQ87 328 aaPredicted RBP11.79□□□□□ -0.52
CBX3-201ENST00000337620 CYTL1Q9NRR1 136 aa11.79□□□□□ -0.52
CBX3-201ENST00000337620 METTL1Q9UBP6 276 aaKnown RBP11.79□□□□□ -0.52
CBX3-201ENST00000337620 ZANQ9Y493 2812 aa11.79□□□□□ -0.52
CBX3-201ENST00000337620 TAAR5O14804 337 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 FGF2P09038 288 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 METTL15P1P0C7V9 234 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 F2RL1P55085 397 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 PJVKQ0ZLH3 352 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 PDLIM3Q53GG5 364 aaPredicted RBP11.78□□□□□ -0.52
CBX3-201ENST00000337620 TEX45Q8NA69 505 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 ZNF680Q8NEM1 530 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 OR2T10Q8NGZ9 312 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 EAF1Q96JC9 268 aaPredicted RBP11.78□□□□□ -0.52
CBX3-201ENST00000337620 ENY2Q9NPA8 101 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 CR1P17927 2039 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 TNCP24821 2201 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 RGS13O14921 159 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 SULT1A1P50225 295 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 UBA52P62987 128 aaKnown RBP11.78□□□□□ -0.52
CBX3-201ENST00000337620 BAXQ07812 192 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 PLGLAQ15195 96 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 MMDQ15546 238 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 RPL7L1Q6DKI1 246 aaKnown RBP11.78□□□□□ -0.52
CBX3-201ENST00000337620 ST8SIA2Q92186 375 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 FBXL15Q9H469 300 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 ZNF257Q9Y2Q1 563 aa11.78□□□□□ -0.52
CBX3-201ENST00000337620 STRAPQ9Y3F4 350 aaKnown RBP11.78□□□□□ -0.52
CBX3-201ENST00000337620 CCDC168Q8NDH2 2452 aa11.77□□□□□ -0.52
CBX3-201ENST00000337620 DYNLT3P51808 116 aa11.77□□□□□ -0.52
CBX3-201ENST00000337620 EXOSC2Q13868 293 aaKnown RBP11.77□□□□□ -0.52
CBX3-201ENST00000337620 CLINT1Q14677 625 aa11.77□□□□□ -0.52
CBX3-201ENST00000337620 FBLN7Q53RD9 439 aa11.77□□□□□ -0.52
CBX3-201ENST00000337620 OR5C1Q8NGR4 320 aa11.77□□□□□ -0.52
CBX3-201ENST00000337620 OR5B3Q8NH48 314 aa11.77□□□□□ -0.52
CBX3-201ENST00000337620 OR4C12Q96R67 309 aa11.77□□□□□ -0.52
CBX3-201ENST00000337620 WFDC1Q9HC57 220 aa11.77□□□□□ -0.52
CBX3-201ENST00000337620 SIGLEC9Q9Y336 463 aa11.77□□□□□ -0.52
CBX3-201ENST00000337620 IFNA7P01567 189 aa11.77□□□□□ -0.53
CBX3-201ENST00000337620 CRYGBP07316 175 aa11.77□□□□□ -0.53
CBX3-201ENST00000337620 BRS3P32247 399 aa11.77□□□□□ -0.53
CBX3-201ENST00000337620 VDAC2P45880 294 aaPredicted RBP11.77□□□□□ -0.53
CBX3-201ENST00000337620 FAM120AOSQ5T036 256 aa11.77□□□□□ -0.53
CBX3-201ENST00000337620 OR8G2PQ6IF36 304 aa11.77□□□□□ -0.53
CBX3-201ENST00000337620 OR1L8Q8NGR8 309 aa11.77□□□□□ -0.53
CBX3-201ENST00000337620 PLEKHA3Q9HB20 300 aa11.77□□□□□ -0.53
CBX3-201ENST00000337620 J3QLI3 93 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 RRHO14718 337 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 ACTL6BO94805 426 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 IFNA10P01566 189 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 FAM106CPP0CH98 169 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 PRCDQ00LT1 54 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 PRSS8Q16651 343 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 KLF17Q5JT82 389 aaPredicted RBP11.76□□□□□ -0.53
CBX3-201ENST00000337620 C10orf55Q5SWW7 151 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 ALKAL2Q6UX46 152 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 TMEM14EPQ6UXP3 125 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 ZNF767PQ75MW2 155 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 PPP1R27Q86WC6 154 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 MMD2Q8IY49 270 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 FOXC2Q99958 501 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 KIAA1456Q9P272 454 aa11.76□□□□□ -0.53
CBX3-201ENST00000337620 A0A0U1RQK1 487 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 E7EUB6 86 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 SMAD7O15105 426 aaKnown RBP11.75□□□□□ -0.53
CBX3-201ENST00000337620 NBR2O15453 112 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 LY86O95711 162 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 TPT1P13693 172 aaKnown RBP11.75□□□□□ -0.53
CBX3-201ENST00000337620 TMEM11P17152 192 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 GNB1P62873 340 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms