RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 FNDC4Q9H6D8 234 aaPredicted RBP11.15□□□□□ -0.63
HLCS-201ENST00000336648 LAMTOR2Q9Y2Q5 125 aa11.15□□□□□ -0.63
HLCS-201ENST00000336648 SLC25A15Q9Y619 301 aa11.15□□□□□ -0.63
HLCS-201ENST00000336648 A0A0G2JLM5 398 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 NKX2-8O15522 239 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 SNAI2O43623 268 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 THY1P04216 161 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 TIMM23BQ5SRD1 257 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 FAM90A1Q86YD7 464 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 DRAM1Q8N682 238 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 RNASEH2CQ8TDP1 164 aaKnown RBP11.14□□□□□ -0.63
HLCS-201ENST00000336648 HS3ST3B1Q9Y662 390 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 ECM29Q5VYK3 1845 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 TRAV12-3A0A0B4J271 114 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 ZNF818PQ6ZRF7 136 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 SLC22A18ASQ8N1D0 253 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 WDYHV1Q96HA8 205 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 YAE1D1Q9NRH1 226 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 SNRPCP09234 159 aaKnown RBP11.14□□□□□ -0.63
HLCS-201ENST00000336648 COX6A1P12074 109 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 TFF2Q03403 129 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 GOLT1AQ6ZVE7 132 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 C18orf15Q96N68 181 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 PIN1P1O15428 100 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 APOHP02749 345 aaPredicted RBP11.14□□□□□ -0.63
HLCS-201ENST00000336648 ASIPP42127 132 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 CENPWQ5EE01 88 aa11.14□□□□□ -0.63
HLCS-201ENST00000336648 A8MWV9 139 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 CEACAM4O75871 244 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 C1orf162Q8NEQ5 155 aaPredicted RBP11.13□□□□□ -0.63
HLCS-201ENST00000336648 NPIPB3Q92617 1050 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 TM2D1Q9BX74 207 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 FMC1Q96HJ9 113 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 IL36BQ9NZH7 164 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 NHSL1Q5SYE7 1610 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 ERVH48-1M5A8F1 160 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 CFAP161Q6P656 301 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 MGST2Q99735 147 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 IFI27L2Q9H2X8 130 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 PAX1P15863 534 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 CBLN1P23435 193 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 GLRXP35754 106 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 ZNF124Q15973 351 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 VKORC1L1Q8N0U8 176 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 LRTM2Q8N967 370 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 SAP25Q8TEE9 199 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 CACNG8Q8WXS5 425 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 CARHSP1Q9Y2V2 147 aaKnown RBP11.13□□□□□ -0.63
HLCS-201ENST00000336648 TNFRSF18Q9Y5U5 241 aa11.13□□□□□ -0.63
HLCS-201ENST00000336648 STARD6P59095 220 aa11.12□□□□□ -0.63
HLCS-201ENST00000336648 IL6RP08887 468 aaPredicted RBP11.12□□□□□ -0.63
HLCS-201ENST00000336648 Q6ZT83 130 aa11.12□□□□□ -0.63
HLCS-201ENST00000336648 HOXA3O43365 443 aaPredicted RBP11.12□□□□□ -0.63
HLCS-201ENST00000336648 H2BFSP57053 126 aa11.12□□□□□ -0.63
HLCS-201ENST00000336648 LINC01590Q5TEZ4 76 aa11.12□□□□□ -0.63
HLCS-201ENST00000336648 LINC00305Q7Z4B0 112 aa11.12□□□□□ -0.63
HLCS-201ENST00000336648 CIARTQ8N365 385 aaPredicted RBP11.12□□□□□ -0.63
HLCS-201ENST00000336648 SCARF2Q96GP6 870 aaPredicted RBP11.12□□□□□ -0.63
HLCS-201ENST00000336648 COX11Q9Y6N1 276 aa11.12□□□□□ -0.63
HLCS-201ENST00000336648 LHFPL4Q7Z7J7 247 aa11.12□□□□□ -0.63
HLCS-201ENST00000336648 SLC25A2Q9BXI2 301 aa11.12□□□□□ -0.63
HLCS-201ENST00000336648 F5P12259 2224 aa11.12□□□□□ -0.63
HLCS-201ENST00000336648 PCOLCEQ15113 449 aa11.12□□□□□ -0.63
HLCS-201ENST00000336648 NEU4Q8WWR8 484 aaPredicted RBP11.12□□□□□ -0.63
HLCS-201ENST00000336648 A0A087WWC5 75 aa11.11□□□□□ -0.63
HLCS-201ENST00000336648 ZNF708P17019 499 aa11.11□□□□□ -0.63
HLCS-201ENST00000336648 APOBEC3AP31941 199 aaPredicted RBP11.11□□□□□ -0.63
HLCS-201ENST00000336648 NDUFA3O95167 84 aa11.11□□□□□ -0.63
HLCS-201ENST00000336648 SSBP2P81877 361 aaPredicted RBP11.11□□□□□ -0.63
HLCS-201ENST00000336648 DCTN5Q9BTE1 182 aa11.11□□□□□ -0.63
HLCS-201ENST00000336648 PILRBQ9UKJ0 227 aa11.11□□□□□ -0.63
HLCS-201ENST00000336648 KIAA0100Q14667 2235 aaKnown RBP11.11□□□□□ -0.63
HLCS-201ENST00000336648 IGKV1D-42A0A075B6H8 117 aa11.11□□□□□ -0.63
HLCS-201ENST00000336648 ATXN8Q156A1 80 aa11.11□□□□□ -0.63
HLCS-201ENST00000336648 NPCDR1Q9BY65 106 aa11.11□□□□□ -0.63
HLCS-201ENST00000336648 LDLRAD2Q5SZI1 272 aa11.11□□□□□ -0.63
HLCS-201ENST00000336648 NXT2Q9NPJ8 142 aaKnown RBP11.11□□□□□ -0.63
HLCS-201ENST00000336648 ATP5J2P56134 94 aa11.11□□□□□ -0.63
HLCS-201ENST00000336648 ASPHD2Q6ICH7 369 aa11.11□□□□□ -0.63
HLCS-201ENST00000336648 CENPVQ7Z7K6 275 aaPredicted RBP11.11□□□□□ -0.63
HLCS-201ENST00000336648 PNKDQ8N490 385 aa11.11□□□□□ -0.63
HLCS-201ENST00000336648 TMEM74BQ9NUR3 256 aa11.11□□□□□ -0.63
HLCS-201ENST00000336648 NHP2Q9NX24 153 aaKnown RBP11.11□□□□□ -0.63
HLCS-201ENST00000336648 MARF1Q9Y4F3 1742 aaKnown RBP11.11□□□□□ -0.63
HLCS-201ENST00000336648 CELA2AP08217 269 aa11.1□□□□□ -0.63
HLCS-201ENST00000336648 NBEAP1P0C6P0 100 aa11.1□□□□□ -0.63
HLCS-201ENST00000336648 TBR1Q16650 682 aa11.1□□□□□ -0.63
HLCS-201ENST00000336648 A0A1B0GUT8 65 aa11.1□□□□□ -0.63
HLCS-201ENST00000336648 NDUFAF3Q9BU61 184 aa11.1□□□□□ -0.63
HLCS-201ENST00000336648 PRDM13Q9H4Q3 707 aa11.1□□□□□ -0.63
HLCS-201ENST00000336648 DPM3Q9P2X0 92 aa11.1□□□□□ -0.63
HLCS-201ENST00000336648 SCN9AQ15858 1988 aa11.1□□□□□ -0.63
HLCS-201ENST00000336648 ACSF3Q4G176 576 aaPredicted RBP11.1□□□□□ -0.63
HLCS-201ENST00000336648 SRXN1Q9BYN0 137 aa11.1□□□□□ -0.63
HLCS-201ENST00000336648 GGTLC3B5MD39 225 aa11.1□□□□□ -0.63
HLCS-201ENST00000336648 UCP1P25874 307 aa11.1□□□□□ -0.63
HLCS-201ENST00000336648 MYH14Q7Z406 1995 aaKnown RBP11.1□□□□□ -0.63
HLCS-201ENST00000336648 FOXI3A8MTJ6 420 aaPredicted RBP11.1□□□□□ -0.63
HLCS-201ENST00000336648 TEX45Q8NA69 505 aa11.1□□□□□ -0.63
HLCS-201ENST00000336648 RCC1LQ96I51 464 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms