RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 OR4A16Q8NH70 328 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 COQ8AQ8NI60 647 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 MDFIQ99750 246 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 SEC22CQ9BRL7 303 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 WNT10AQ9GZT5 417 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 WSB1Q9Y6I7 421 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 PLXNB1O43157 2135 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 TRAV41A0A0B4J266 112 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 A0A0B4J2A0 478 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 PIGBOS1A0A0B4J2F0 54 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 MSGN1A6NI15 193 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 DUS4LO95620 317 aaKnown RBP11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 VDAC1P21796 283 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 RPL27AP46776 148 aaKnown RBP11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 ECSCRQ19T08 205 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 RGS21Q2M5E4 152 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 FAM219AQ8IW50 185 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 SGMS2Q8NHU3 365 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 ZNF431Q8TF32 576 aaPredicted RBP11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 CHPT1Q8WUD6 406 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 SRSF12Q8WXF0 261 aaKnown RBP11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 GPR146Q96CH1 333 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 PHB2Q99623 299 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 MARVELD1Q9BSK0 173 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 COMMD5Q9GZQ3 224 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 SHPKQ9UHJ6 478 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 PRNDQ9UKY0 176 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 OR51B2Q9Y5P1 312 aa11.08□□□□□ -0.64
APOBEC3B-202ENST00000335760 DUXBA0A1W2PPF3 345 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 PSMB11A5LHX3 300 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 DBX1A6NMT0 343 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 C15orf61A6NNL5 157 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 G3V318 75 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 RBMXL2O75526 392 aaKnown RBP11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 IL5P05113 134 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 FGF2P09038 288 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 CRIP2P52943 208 aaPredicted RBP11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 UNQ5815/PRO19632Q6UWF5 114 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 ZNF329Q86UD4 541 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 LFNGQ8NES3 379 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 MITD1Q8WV92 249 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 LSM10Q969L4 123 aaKnown RBP11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 FYTTD1Q96QD9 318 aaKnown RBP11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 GON7Q9BXV9 100 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 ZNF580Q9UK33 172 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 ATRQ13535 2644 aa11.07□□□□□ -0.64
APOBEC3B-202ENST00000335760 A0A0B4J293 547 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 TEX50A0A1B0GTY4 177 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 E7EUB6 86 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 DHFRP00374 187 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 HOXB5P09067 269 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 APELAP0DMC3 54 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 SLC35B1P78383 322 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 TMEM267Q0VDI3 215 aaPredicted RBP11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 AKIRIN2Q53H80 203 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 C10orf99Q6UWK7 81 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 C12orf54Q6X4T0 127 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 Q6ZRM9 215 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 SPIN2AQ99865 258 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 SPIN2BQ9BPZ2 258 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 QTRT1Q9BXR0 403 aaKnown RBP11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 GPN1Q9HCN4 374 aaPredicted RBP11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 TMEM14BQ9NUH8 114 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 FKBP11Q9NYL4 201 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 CACNG5Q9UF02 275 aa11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 FOXA2Q9Y261 457 aaPredicted RBP11.06□□□□□ -0.64
APOBEC3B-202ENST00000335760 HMX3A6NHT5 357 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 CGB1A6NKQ9 187 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 TEX22C9J3V5 150 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 PRAF2O60831 178 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 KRTAP21-3Q3LHN1 58 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 C19orf54Q5BKX5 351 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 NMSQ5H8A3 153 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 ASPHD1Q5U4P2 390 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 UXS1Q8NBZ7 420 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 OR5AU1Q8NGC0 362 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 OR1L8Q8NGR8 309 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 WFDC12Q8WWY7 111 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 HINT2Q9BX68 163 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 TMED3Q9Y3Q3 217 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 TNCP24821 2201 aa11.05□□□□□ -0.64
APOBEC3B-202ENST00000335760 A0A1B0GW64 132 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 A0A1W2PN81 502 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 ST8SIA3O43173 380 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 ADAP1O75689 374 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 TRAPPC2P0DI81 140 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 TRAPPC2BP0DI82 140 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 SULT1A3P0DMM9 295 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 SULT1A4P0DMN0 295 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 CHRNA7P36544 502 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 KRTAP10-3P60369 221 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 CFHR3Q02985 330 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 SMCO1Q147U7 214 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 GGNBP1Q5YKI7 109 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 C12orf45Q8N5I9 185 aaPredicted RBP11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 MINDY2Q8NBR6 621 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 OR5B3Q8NH48 314 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 WIPF2Q8TF74 440 aaPredicted RBP11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 NDUFA4L2Q9NRX3 87 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms