RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 ARSJQ5FYB0 599 aaPredicted RBP19.22■□□□□ 0.67
NDEL1-201ENST00000334527 KCNIP4Q6PIL6 250 aa19.22■□□□□ 0.67
NDEL1-201ENST00000334527 SLC24A4Q8NFF2 622 aa19.22■□□□□ 0.67
NDEL1-201ENST00000334527 RAI1Q7Z5J4 1906 aaPredicted RBP19.22■□□□□ 0.67
NDEL1-201ENST00000334527 HIST1H1BP16401 226 aaKnown RBP19.22■□□□□ 0.67
NDEL1-201ENST00000334527 HSPE1P61604 102 aaKnown RBP19.22■□□□□ 0.67
NDEL1-201ENST00000334527 TCF23Q7RTU1 214 aa19.22■□□□□ 0.67
NDEL1-201ENST00000334527 OR1P1Q8NH06 330 aa19.22■□□□□ 0.67
NDEL1-201ENST00000334527 GAFA1Q96PS6 74 aa19.22■□□□□ 0.67
NDEL1-201ENST00000334527 ENY2Q9NPA8 101 aa19.22■□□□□ 0.67
NDEL1-201ENST00000334527 IL19Q9UHD0 177 aa19.22■□□□□ 0.67
NDEL1-201ENST00000334527 TANC2Q9HCD6 1990 aa19.22■□□□□ 0.67
NDEL1-201ENST00000334527 IL6RP08887 468 aaPredicted RBP19.21■□□□□ 0.67
NDEL1-201ENST00000334527 C9orf152Q5JTZ5 239 aa19.21■□□□□ 0.67
NDEL1-201ENST00000334527 CCL13Q99616 98 aa19.21■□□□□ 0.67
NDEL1-201ENST00000334527 PRDM13Q9H4Q3 707 aa19.21■□□□□ 0.67
NDEL1-201ENST00000334527 XKRY2A2RUG3 117 aa19.21■□□□□ 0.67
NDEL1-201ENST00000334527 TIMP3P35625 211 aa19.21■□□□□ 0.67
NDEL1-201ENST00000334527 ZNF439Q8NDP4 499 aa19.21■□□□□ 0.67
NDEL1-201ENST00000334527 TMEM204Q9BSN7 226 aa19.21■□□□□ 0.67
NDEL1-201ENST00000334527 IDI2-AS1Q9NZ38 188 aa19.21■□□□□ 0.67
NDEL1-201ENST00000334527 PGPEP1LA6NFU8 196 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 ZNF729A6NN14 1252 aaPredicted RBP19.2■□□□□ 0.66
NDEL1-201ENST00000334527 CA2P00918 260 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 MYOD1P15172 320 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 FAM27E3Q08E93 113 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 TEPPQ6URK8 271 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 Q6ZS92 163 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 C22orf34Q6ZV56 151 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 FAM216BQ8N7L0 139 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 ADTRPQ96IZ2 230 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 CD99P14209 185 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 ACTL10Q5JWF8 245 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 FAM78BQ5VT40 261 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 ZNF114Q8NC26 417 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 HINT2Q9BX68 163 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 FUT9Q9Y231 359 aa19.2■□□□□ 0.66
NDEL1-201ENST00000334527 TYMSP04818 313 aa19.19■□□□□ 0.66
NDEL1-201ENST00000334527 C1QTNF9P0C862 333 aa19.19■□□□□ 0.66
NDEL1-201ENST00000334527 STPG3Q8N7X2 389 aa19.19■□□□□ 0.66
NDEL1-201ENST00000334527 TXNDC17Q9BRA2 123 aa19.19■□□□□ 0.66
NDEL1-201ENST00000334527 SFXN3Q9BWM7 321 aa19.19■□□□□ 0.66
NDEL1-201ENST00000334527 CISD2Q8N5K1 135 aaKnown RBP19.19■□□□□ 0.66
NDEL1-201ENST00000334527 TMEM37Q8WXS4 190 aa19.19■□□□□ 0.66
NDEL1-201ENST00000334527 OR51B2Q9Y5P1 312 aa19.19■□□□□ 0.66
NDEL1-201ENST00000334527 CNOT1A5YKK6 2376 aaKnown RBP19.19■□□□□ 0.66
NDEL1-201ENST00000334527 TTC28Q96AY4 2481 aa19.18■□□□□ 0.66
NDEL1-201ENST00000334527 MMP23AO75900 390 aa19.18■□□□□ 0.66
NDEL1-201ENST00000334527 GAMTQ14353 236 aa19.18■□□□□ 0.66
NDEL1-201ENST00000334527 EFNB3Q15768 340 aa19.18■□□□□ 0.66
NDEL1-201ENST00000334527 DNLZQ5SXM8 178 aa19.18■□□□□ 0.66
NDEL1-201ENST00000334527 ZCCHC14Q8WYQ9 949 aaKnown RBP19.18■□□□□ 0.66
NDEL1-201ENST00000334527 SEPSECSQ9HD40 501 aaKnown RBP19.18■□□□□ 0.66
NDEL1-201ENST00000334527 SCO2A0A1W2PP80 73 aa19.18■□□□□ 0.66
NDEL1-201ENST00000334527 TNFSF4P23510 183 aa19.18■□□□□ 0.66
NDEL1-201ENST00000334527 SPATA31B1PQ5VZV4 182 aa19.18■□□□□ 0.66
NDEL1-201ENST00000334527 ICE1Q9Y2F5 2266 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 TRBV20OR9-2A0A075B6H5 130 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 AMBPP02760 352 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 CD40P25942 277 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 RAB31Q13636 194 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 COA6Q5JTJ3 125 aaKnown RBP19.17■□□□□ 0.66
NDEL1-201ENST00000334527 ZNF788Q6ZQV5 615 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 ACY3Q96HD9 319 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 YTHDF2Q9Y5A9 579 aaKnown RBP19.17■□□□□ 0.66
NDEL1-201ENST00000334527 K7EM74 188 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 IL3RAP26951 378 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 GCHFRP30047 84 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 NUBP1P53384 320 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 RHOBP62745 196 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 LCN2P80188 198 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 SNRNP40Q96DI7 357 aaKnown RBP19.17■□□□□ 0.66
NDEL1-201ENST00000334527 DCAF16Q9NXF7 216 aa19.17■□□□□ 0.66
NDEL1-201ENST00000334527 POU2AF1Q16633 256 aa19.16■□□□□ 0.66
NDEL1-201ENST00000334527 SFRP2Q96HF1 295 aa19.16■□□□□ 0.66
NDEL1-201ENST00000334527 CEACAM8P31997 349 aaPredicted RBP19.15■□□□□ 0.66
NDEL1-201ENST00000334527 RPL29P47914 159 aaKnown RBP19.15■□□□□ 0.66
NDEL1-201ENST00000334527 RBMXL3Q8N7X1 1067 aaKnown RBP19.15■□□□□ 0.66
NDEL1-201ENST00000334527 ZNRD1Q9P1U0 126 aa19.15■□□□□ 0.66
NDEL1-201ENST00000334527 PRNDQ9UKY0 176 aa19.15■□□□□ 0.66
NDEL1-201ENST00000334527 A8MXE2 369 aa19.15■□□□□ 0.66
NDEL1-201ENST00000334527 CRYABP02511 175 aaKnown RBP19.15■□□□□ 0.66
NDEL1-201ENST00000334527 IRF2P14316 349 aa19.15■□□□□ 0.66
NDEL1-201ENST00000334527 IGFBP2P18065 325 aa19.15■□□□□ 0.66
NDEL1-201ENST00000334527 COL8A2P25067 703 aa19.15■□□□□ 0.66
NDEL1-201ENST00000334527 LINC00574Q9H8X3 128 aa19.15■□□□□ 0.66
NDEL1-201ENST00000334527 J3QR06 171 aa19.14■□□□□ 0.66
NDEL1-201ENST00000334527 TM4SF5O14894 197 aa19.14■□□□□ 0.66
NDEL1-201ENST00000334527 IGKV1-16P04430 117 aa19.14■□□□□ 0.66
NDEL1-201ENST00000334527 RPUSD1Q9UJJ7 312 aaKnown RBP19.14■□□□□ 0.66
NDEL1-201ENST00000334527 MDFIC2A0A1B0GVS7 189 aa19.14■□□□□ 0.65
NDEL1-201ENST00000334527 FOXH1O75593 365 aa19.14■□□□□ 0.65
NDEL1-201ENST00000334527 CT45A6P0DMU7 189 aa19.14■□□□□ 0.65
NDEL1-201ENST00000334527 CT45A5P0DMU8 189 aa19.14■□□□□ 0.65
NDEL1-201ENST00000334527 CT45A7P0DMV0 189 aa19.14■□□□□ 0.65
NDEL1-201ENST00000334527 PRSS8Q16651 343 aa19.14■□□□□ 0.65
NDEL1-201ENST00000334527 SLC25A48Q6ZT89 311 aaKnown RBP19.14■□□□□ 0.65
NDEL1-201ENST00000334527 TMEM144Q7Z5S9 345 aa19.14■□□□□ 0.65
NDEL1-201ENST00000334527 CORO2AQ92828 525 aa19.14■□□□□ 0.65
NDEL1-201ENST00000334527 PLEKHA3Q9HB20 300 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms