RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ZFP57Q9NU63 452 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 TNCP24821 2201 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 TMEM218A2RU14 115 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 DNAJC9-AS1A6NH13 148 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 SLC25A17O43808 307 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 SLC25A4P12235 298 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 HNF1AP20823 631 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 UCP1P25874 307 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 CD1BP29016 333 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 RPS16P62249 146 aaKnown RBP13.16□□□□□ -0.3
SHOX-201ENST00000334060 TMEM268Q5VZI3 342 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 ZNF600Q6ZNG1 722 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 Q6ZRM9 215 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 SELENOHQ8IZQ5 122 aaKnown RBP13.16□□□□□ -0.3
SHOX-201ENST00000334060 KCNRGQ8N5I3 272 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 SLC35G3Q8N808 338 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 CCDC71LQ8N9Z2 235 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 GALNT14Q96FL9 552 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 HARBI1Q96MB7 349 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 CLCC1Q96S66 551 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 FBXL15Q9H469 300 aa13.16□□□□□ -0.3
SHOX-201ENST00000334060 LINC01548A6NM66 108 aa13.15□□□□□ -0.3
SHOX-201ENST00000334060 WRBO00258 174 aa13.15□□□□□ -0.3
SHOX-201ENST00000334060 NXPH3O95157 252 aa13.15□□□□□ -0.3
SHOX-201ENST00000334060 IFNA2P01563 188 aa13.15□□□□□ -0.3
SHOX-201ENST00000334060 SAA1P0DJI8 122 aaPredicted RBP13.15□□□□□ -0.3
SHOX-201ENST00000334060 TMEM11P17152 192 aa13.15□□□□□ -0.3
SHOX-201ENST00000334060 SSBP2P81877 361 aaPredicted RBP13.15□□□□□ -0.3
SHOX-201ENST00000334060 CATR1Q13166 79 aa13.15□□□□□ -0.3
SHOX-201ENST00000334060 SFT2D1Q8WV19 159 aa13.15□□□□□ -0.3
SHOX-201ENST00000334060 SEC22AQ96IW7 307 aa13.15□□□□□ -0.3
SHOX-201ENST00000334060 PRDM13Q9H4Q3 707 aa13.15□□□□□ -0.3
SHOX-201ENST00000334060 LIN7CQ9NUP9 197 aaKnown RBP13.15□□□□□ -0.3
SHOX-201ENST00000334060 TCF19Q9Y242 345 aa13.15□□□□□ -0.3
SHOX-201ENST00000334060 A6NDX4 124 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 SIX6O95475 246 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 APOA2P02652 100 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 OR9G9P0C7N8 305 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 RAB5BP61020 215 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 MMDQ15546 238 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 C10orf55Q5SWW7 151 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 CCDC144NLQ6NUI1 221 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 FAM216AQ8WUB2 273 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 FLYWCH2Q96CP2 140 aaKnown RBP13.14□□□□□ -0.31
SHOX-201ENST00000334060 SCGB3A2Q96PL1 93 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 OOSP1A8MZH6 123 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 TXNL1O43396 289 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 CDS2O95674 445 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 MOSP00540 346 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 HOXB5P09067 269 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 BLCAPP62952 87 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 EBI3Q14213 229 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 TMEM177Q53S58 311 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 LIAT1Q6ZQX7 453 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 PDPNQ86YL7 162 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 R3HDM4Q96D70 268 aa13.14□□□□□ -0.31
SHOX-201ENST00000334060 MARCH11A6NNE9 402 aa13.13□□□□□ -0.31
SHOX-201ENST00000334060 E7EUB6 86 aa13.13□□□□□ -0.31
SHOX-201ENST00000334060 BCL2L11O43521 198 aa13.13□□□□□ -0.31
SHOX-201ENST00000334060 OPN1MWP04001 364 aa13.13□□□□□ -0.31
SHOX-201ENST00000334060 FABP1P07148 127 aa13.13□□□□□ -0.31
SHOX-201ENST00000334060 OPN1MW2P0DN77 364 aa13.13□□□□□ -0.31
SHOX-201ENST00000334060 OPN1MW3P0DN78 364 aa13.13□□□□□ -0.31
SHOX-201ENST00000334060 OR2B8PP59922 312 aa13.13□□□□□ -0.31
SHOX-201ENST00000334060 PSG5Q15238 335 aa13.13□□□□□ -0.31
SHOX-201ENST00000334060 RTL8BQ17RB0 113 aa13.13□□□□□ -0.31
SHOX-201ENST00000334060 Q8N9W7 124 aa13.13□□□□□ -0.31
SHOX-201ENST00000334060 OR4S2Q8NH73 311 aa13.13□□□□□ -0.31
SHOX-201ENST00000334060 TET2Q6N021 2002 aaPredicted RBP13.12□□□□□ -0.31
SHOX-201ENST00000334060 NCBP2LA6PVI3 153 aaKnown RBP13.12□□□□□ -0.31
SHOX-201ENST00000334060 RLN2P04090 185 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 SERPINE2P07093 398 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 BPIFB3P59826 476 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 TMEM95Q3KNT9 176 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 RNF212Q495C1 297 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 ADTRPQ96IZ2 230 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 RHOVQ96L33 236 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 HSPB9Q9BQS6 159 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 SLC25A33Q9BSK2 321 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 HPRT1P00492 218 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 P0C879 139 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 DYNLT3P51808 116 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 TAS2R31P59538 309 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 NDPQ00604 133 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 SPINK9Q5DT21 86 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 HIST2H2BDQ6DRA6 164 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 OR4A47Q6IF82 309 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 ZNF546Q86UE3 836 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 OR4C13Q8NGP0 309 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 OR2T10Q8NGZ9 312 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 MITD1Q8WV92 249 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 GPR146Q96CH1 333 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 TMEM56Q96MV1 263 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 SEC11CQ9BY50 192 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 OR51M1Q9H341 326 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 TMEM140Q9NV12 185 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 TMEM56-RWDD3S4R434 201 aa13.12□□□□□ -0.31
SHOX-201ENST00000334060 FBN1P35555 2871 aaKnown RBP13.12□□□□□ -0.31
SHOX-201ENST00000334060 A0A1B0GW64 132 aa13.11□□□□□ -0.31
SHOX-201ENST00000334060 RNF212BA8MTL3 300 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms