RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 TCL1AP56279 114 aa20.24■□□□□ 0.83
SOX1-201ENST00000330949 CLDN18P56856 261 aa20.24■□□□□ 0.83
SOX1-201ENST00000330949 RPL30P62888 115 aaKnown RBP20.24■□□□□ 0.83
SOX1-201ENST00000330949 TNXAQ16473 311 aa20.24■□□□□ 0.83
SOX1-201ENST00000330949 RNASE7Q9H1E1 156 aaKnown RBP20.24■□□□□ 0.83
SOX1-201ENST00000330949 FAM71F2Q6NXP2 309 aa20.24■□□□□ 0.83
SOX1-201ENST00000330949 C12orf54Q6X4T0 127 aa20.24■□□□□ 0.83
SOX1-201ENST00000330949 MGST2Q99735 147 aa20.24■□□□□ 0.83
SOX1-201ENST00000330949 NUDT3O95989 172 aa20.23■□□□□ 0.83
SOX1-201ENST00000330949 TIGITQ495A1 244 aa20.23■□□□□ 0.83
SOX1-201ENST00000330949 BVES-AS1Q5T3Y7 98 aa20.23■□□□□ 0.83
SOX1-201ENST00000330949 ZNF331Q9NQX6 463 aaPredicted RBP20.23■□□□□ 0.83
SOX1-201ENST00000330949 M0R1X1 148 aa20.23■□□□□ 0.83
SOX1-201ENST00000330949 ISLRO14498 428 aa20.23■□□□□ 0.83
SOX1-201ENST00000330949 CCL3P10147 92 aa20.23■□□□□ 0.83
SOX1-201ENST00000330949 DOLPP1Q86YN1 238 aa20.23■□□□□ 0.83
SOX1-201ENST00000330949 KCNIP1Q9NZI2 227 aa20.23■□□□□ 0.83
SOX1-201ENST00000330949 AHCTF1Q8WYP5 2266 aa20.23■□□□□ 0.83
SOX1-201ENST00000330949 SMIM27A0A1W2PRY6 76 aa20.22■□□□□ 0.83
SOX1-201ENST00000330949 ZNF716A6NP11 495 aa20.22■□□□□ 0.83
SOX1-201ENST00000330949 USF1P22415 310 aaPredicted RBP20.22■□□□□ 0.83
SOX1-201ENST00000330949 FXYD3Q14802 87 aa20.22■□□□□ 0.83
SOX1-201ENST00000330949 Q6P435 159 aa20.22■□□□□ 0.83
SOX1-201ENST00000330949 NEUROG1Q92886 237 aa20.22■□□□□ 0.83
SOX1-201ENST00000330949 ARF1P84077 181 aaKnown RBP20.22■□□□□ 0.83
SOX1-201ENST00000330949 PQLC2Q6ZP29 291 aa20.22■□□□□ 0.83
SOX1-201ENST00000330949 OR52L2PQ8NGH6 319 aa20.22■□□□□ 0.83
SOX1-201ENST00000330949 MBNL3Q9NUK0 354 aaKnown RBP20.22■□□□□ 0.83
SOX1-201ENST00000330949 C2orf70A6NJV1 201 aa20.22■□□□□ 0.83
SOX1-201ENST00000330949 C17orf98A8MV24 154 aa20.21■□□□□ 0.83
SOX1-201ENST00000330949 NINJ1Q92982 152 aa20.21■□□□□ 0.83
SOX1-201ENST00000330949 ARL2-SNX15V9GYD0 113 aa20.21■□□□□ 0.83
SOX1-201ENST00000330949 WISP2O76076 250 aa20.21■□□□□ 0.83
SOX1-201ENST00000330949 GNG3P63215 75 aa20.21■□□□□ 0.83
SOX1-201ENST00000330949 SLAQ13239 276 aa20.21■□□□□ 0.83
SOX1-201ENST00000330949 RASL11AQ6T310 242 aa20.21■□□□□ 0.83
SOX1-201ENST00000330949 ZNF808Q8N4W9 903 aaPredicted RBP20.21■□□□□ 0.83
SOX1-201ENST00000330949 MEGF9Q9H1U4 602 aa20.21■□□□□ 0.83
SOX1-201ENST00000330949 IL19Q9UHD0 177 aa20.21■□□□□ 0.83
SOX1-201ENST00000330949 IZUMO1RA6ND01 250 aa20.2■□□□□ 0.82
SOX1-201ENST00000330949 OTX2P32243 289 aa20.2■□□□□ 0.82
SOX1-201ENST00000330949 EIF4EBP1Q13541 118 aaPredicted RBP20.2■□□□□ 0.82
SOX1-201ENST00000330949 TAAR6Q96RI8 345 aa20.2■□□□□ 0.82
SOX1-201ENST00000330949 TMEM70Q9BUB7 260 aa20.2■□□□□ 0.82
SOX1-201ENST00000330949 SAP30LQ9HAJ7 183 aa20.2■□□□□ 0.82
SOX1-201ENST00000330949 CORTO00230 105 aa20.2■□□□□ 0.82
SOX1-201ENST00000330949 SPINK2P20155 84 aa20.2■□□□□ 0.82
SOX1-201ENST00000330949 CA6P23280 308 aa20.2■□□□□ 0.82
SOX1-201ENST00000330949 ARF6P62330 175 aa20.2■□□□□ 0.82
SOX1-201ENST00000330949 EFNB3Q15768 340 aa20.2■□□□□ 0.82
SOX1-201ENST00000330949 WDR31Q8NA23 367 aa20.2■□□□□ 0.82
SOX1-201ENST00000330949 NBEAP1P0C6P0 100 aa20.19■□□□□ 0.82
SOX1-201ENST00000330949 IGFBP7Q16270 282 aa20.19■□□□□ 0.82
SOX1-201ENST00000330949 IBA57Q5T440 356 aaKnown RBP20.19■□□□□ 0.82
SOX1-201ENST00000330949 SVIPQ8NHG7 77 aa20.19■□□□□ 0.82
SOX1-201ENST00000330949 PKIBQ9C010 78 aa20.19■□□□□ 0.82
SOX1-201ENST00000330949 MS4A5Q9H3V2 200 aa20.19■□□□□ 0.82
SOX1-201ENST00000330949 ZDBF2Q9HCK1 2354 aa20.19■□□□□ 0.82
SOX1-201ENST00000330949 C5orf49A4QMS7 147 aa20.19■□□□□ 0.82
SOX1-201ENST00000330949 TMPRSS3P57727 454 aa20.19■□□□□ 0.82
SOX1-201ENST00000330949 BRWD1-AS2P59051 145 aa20.19■□□□□ 0.82
SOX1-201ENST00000330949 ASPMQ8IZT6 3477 aa20.19■□□□□ 0.82
SOX1-201ENST00000330949 DOCK7Q96N67 2140 aa20.19■□□□□ 0.82
SOX1-201ENST00000330949 MUC21A0A0G2JKD1 596 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 MUC21A0A140T8X8 626 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 PSG9Q00887 426 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 NRN1LQ496H8 165 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 MUC21Q5SSG8 566 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 SLC25A34Q6PIV7 304 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 WIPF2Q8TF74 440 aaPredicted RBP20.18■□□□□ 0.82
SOX1-201ENST00000330949 TMEM45BQ96B21 275 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 PRDM6Q9NQX0 595 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 ANKRD30BLA7E2S9 258 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 NPY1RP25929 384 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 CA7P43166 264 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 KLF5Q13887 457 aaPredicted RBP20.18■□□□□ 0.82
SOX1-201ENST00000330949 SPACA3Q8IXA5 215 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 TDHQ8IZJ6 230 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 C5orf30Q96GV9 206 aa20.18■□□□□ 0.82
SOX1-201ENST00000330949 ADAMTS20P59510 1910 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 LOC102724200A0A096LPH7 203 aaPredicted RBP20.17■□□□□ 0.82
SOX1-201ENST00000330949 OR4C46A6NHA9 309 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 C3orf80F5H4A9 247 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 CD5LO43866 347 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 IGHV3-9P01782 118 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 VWA1Q6PCB0 445 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 PET117Q6UWS5 81 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 ST6GALNAC6Q969X2 333 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 TECRQ9NZ01 308 aaKnown RBP20.17■□□□□ 0.82
SOX1-201ENST00000330949 MRPS17Q9Y2R5 130 aaKnown RBP20.17■□□□□ 0.82
SOX1-201ENST00000330949 MPC1Q9Y5U8 109 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 OR2H2O95918 312 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 CRYBB3P26998 211 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 SSTR5P35346 364 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 SSMEM1Q8WWF3 244 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 SERTAD4Q9NUC0 356 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 PEF1Q9UBV8 284 aaKnown RBP20.17■□□□□ 0.82
SOX1-201ENST00000330949 CCL2P13500 99 aa20.17■□□□□ 0.82
SOX1-201ENST00000330949 RNASEKQ6P5S7 137 aaKnown RBP20.17■□□□□ 0.82
SOX1-201ENST00000330949 YRDCQ86U90 279 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms